UFO11676.5prime Sequence
1078 bp (971 high quality bases) assembled on 2012-06-12
> UFO11676.5prime
CAGTCGACATGAAGTCCGCACTACTTTTGATCTGCCTTGCCTTCTTCGTG
GCGCTCCTAAGCACCGGAAATGCGTGCGATCCCAATTCTGACAACCAGCC
CGACTGCAGCGACGCATCCAACGTGCAAACGAACATCCGCAACTTCTGGG
ATCCCACTCGCTACTGGTGGTGTGAGTCCTCCACCTCCACGGCCACGGCT
GTGTTGTGCCCGTTGTCCACTGGATTCGACCCCACAAAGAAGGAGTGCGT
TTCATGGAGCGAATGGTCTTGGACTGCTTACTGTGCAAGCTTTCTAGACC
ATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAAT
CATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCT
TGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACA
AATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCA
AGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACT
GTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCA
TGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATA
ATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCA
CGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAA
AACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTA
ACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAATCGTCGTG
TATTCACTCCAGAGCGATGAAACGTTTCAGTTTGCTCATGGAAAACGTGT
AACAGGTGACACTATCCCATATCACCAGCTCACCGTCTTTCATGCCATAC
GAAATTCGGATGAGCATTCATCAGGCGGCCAGATGTGAATAACGCCGATA
AACTTGGGCTTATTTTTTCTTTACGTCTTTAAAAGCGTATATTCAGCTGA
CGTCTGTTATAAGTACATGGAGCACTGA
UFO11676.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:07:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Peritrophin-15a-RA | 361 | CG17814-RA | 34..310 | 8..284 | 1385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:07:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8395716..8395982 | 284..18 | 1335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:07:36 has no hits.
UFO11676.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:41:27 Download gff for
UFO11676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15a-RA | 13..298 | 1..284 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:40:05 Download gff for
UFO11676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15a-RA | 25..310 | 1..284 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:48:48 Download gff for
UFO11676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15a-RA | 25..310 | 1..284 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:48:48 Download gff for
UFO11676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8395716..8395982 | 18..284 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:40:05 Download gff for
UFO11676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8395716..8395982 | 18..284 | 100 | | Minus |
