UFO11685.5prime Sequence
1094 bp (996 high quality bases) assembled on 2012-06-12
> UFO11685.5prime
CAGTCGACATGTGCACAACAATTTCGTTCGCGGAACCCGAAATCGTGCTC
GGCCATGGCCGCAGGGTGCTCTTCGTGAACCCCGACGACCTGCAGATATT
CAAGGAGATCGAGCTGCCGCCCGACCTTGGCCTGAAAGGCCATACATCCC
AGTCGCAGGAATCGTGTACAGCCGCAGCAGCCGCATCCACAGCCACAGCC
GCATCCGGTCAGGCACCGGGTGGCAAGGAGCAACAGCTTGCCAATCAGCC
AGAGGAGGGCGGAACCTCTGCCAGCGCCTCCGGTTTGGGATGTGCCACCA
GCACATCGGTACAGAATGTGGCCTACTCGCCAGACGGACAGCTGCTGGCC
GTGACCACCAGTGGAAAACAGAAAGCTCTCCTGCTCTATCGTTCACGGCC
GGAGAACGCCCGCCTGCTCTCCGCCCGCCCACTGGCCCGGGCGTCCAGTG
CCCTGCGCTTCTGCAGCGACAGCAGCTCCATTCTGGTCACAGACAAGACT
GGCGATTGCTATCAGTACGACTGCGTTGAGGTGGAGGCTCCGCCGCGCCT
GCTGTTGGGCCATTTAAGTGTGGTATACGACATCCTGTGGTCGGAGGACC
AGCAGCATATCATCACCTGCGATCGGGATGATAAGATACGCGTGACCAAC
TATCCCGCCACCTTTGACATCCACAGCTATTGCCTGGGGCCACAGGGAGT
TTGTCTCAGGCCTGGCACTGCTCACGGAGCAGCATATCGCCTCCGCTTCG
GGGGACAAGACCTTGCGCGTATGGAACTACATTCAGGGCAAAGAGCTGCT
GCAGCACGAGCTACCAGCACCGGCGGTTCGTTTATTGGTACGCCAGCTGG
AGCCGGAGAAGGTCTTCCAGGCGCGGTGCTCTTCTACGAGCACGTGGACG
CCCTGGATTGTATCGCCTGAGCGCAGCTCCGATGACCCTGAGCGTGACGG
CCACACACTGGTTTGCCGCCGAAGCGGGCTCATGAGCATTAGCACTTTAC
TTTAGCAGCGGACCGATCTACATCACGGGCGCAAGAACGAACGCTAGCCT
GCCGTCTACGACTCGCACTGCCAGCGGCTAACACGCCTGGCCAA
UFO11685.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:07:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wuho-RA | 1463 | CG15897-RA | 55..1125 | 9..1067 | 4885 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:07:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6288154..6289198 | 9..1045 | 4570 | 97.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:07:55 has no hits.
UFO11685.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:41:32 Download gff for
UFO11685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wuho-RA | 27..1102 | 1..1067 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:40:19 Download gff for
UFO11685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wuho-RA | 50..1125 | 1..1067 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:48:59 Download gff for
UFO11685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wuho-RA | 50..1125 | 1..1067 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:48:59 Download gff for
UFO11685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6288149..6289224 | 1..1067 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:40:19 Download gff for
UFO11685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6182182..6183257 | 1..1067 | 97 | | Plus |
