UFO11714.5prime Sequence
908 bp (821 high quality bases) assembled on 2012-06-28
> UFO11714.5prime
GAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGT
ATAGCATACATTATACGAAGTTATCAGTCGACATGATCAGGGGAATAGAG
GAGCACGTACATATATATGTCCGCGCCCACTTCCGAGCCTCGCTGGAGAC
CTCGGAGTACGAGAACACCTCGAACCTATTCCATGTGACGGCCGCCGAGC
AGACCGCCGCTCTTCTGGCCCGCTGCGAAATCCTGCTGGCTGCAGCCAGT
TCTGCATCGGGATCGGGATCGGGACTGGAACTGGGATCAGGGCTGGGATG
CGCAGACGAGCAGGCGGCAGCTAACCATCGTTCCAGCCTGGTCGACTGTG
TCGATAGCAAGGTGGGCGCGGAGACCGGTCCCAGCGGTTATCTGGAGATG
CTTGCCTCCCCGTCACCCTCGAAAAGCTCACTGTCCGCCTCGCGGGAGTA
CATTGATTTGGGCAGCAGCGGATCCCTGGATCGTTGCTCCGTCAATCAAC
CGGTTCCGGCAGCGAAGGACAAGGAGCCACATCAGCAGCTCTACGAGATT
TGCCAGGGCCAGGGAGCGGGCCAGGACGAGGATGAGGCGCAACAGGCGAT
CACCTTTACCCACGAGGTGTTCATTGACTGCCCGTATGCAGATCTGCCCG
CTGGCCACTTGTCCCTGCAGAGGTCAACAAAGTACGGACAGCTGCAGAGG
ATTGTGCCCAAGCGGCTGTTCTTCGACCAGACCCGCAAGTGCTACTGTGG
CATCCTCAACGATTGATGCTGTGCTATGCCGACGGCCCGACCGCCTGTCG
ACCCAGCAGCACGCTCTACTTGAGAGCTCTCATCGAGATGAACACTCGGA
AAGGTAGCGGGCGACATCTGCCTCGAATCCAAACGACGACCAACAAGAGT
TCTGTACA
UFO11714.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:23:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| blow-RB | 2270 | CG1363-RB | 54..894 | 82..907 | 3760 | 97.5 | Plus |
| blow-RD | 2612 | CG1363-RD | 431..1236 | 117..907 | 3585 | 97.4 | Plus |
| blow-RA | 2632 | CG1363-RA | 451..1256 | 117..907 | 3585 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:23:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7581962..7582354 | 823..432 | 1915 | 99.7 | Minus |
| 2R | 25286936 | 2R | 7582614..7582928 | 431..117 | 1575 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:23:21 has no hits.
UFO11714.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-28 10:02:43 Download gff for
UFO11714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| blow-RB | 48..832 | 74..854 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:49:45 Download gff for
UFO11714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| blow-RB | 48..832 | 74..854 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:56:30 Download gff for
UFO11714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| blow-RB | 48..832 | 74..854 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:56:30 Download gff for
UFO11714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7581962..7582354 | 432..823 | 99 | <- | Minus |
| 2R | 7582614..7582928 | 117..431 | 100 | <- | Minus |
| 2R | 7584135..7584171 | 77..116 | 92 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:49:45 Download gff for
UFO11714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3469467..3469859 | 432..823 | 99 | <- | Minus |
| arm_2R | 3470119..3470433 | 117..431 | 100 | <- | Minus |
| arm_2R | 3471640..3471676 | 77..116 | 92 | <- | Minus |
