UFO11720.5prime Sequence
1134 bp (1042 high quality bases) assembled on 2012-06-28
> UFO11720.5prime
TGAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCG
TATAGCATACATTATACGAAGTTATCAGTCGACATGATGCAAATCAAGCG
CCTCCTGTGCAAATCCTGCGGCCTGGGCACCCTTCTGGTGGCGGTCGTCT
GGCTGCTGGCGCTGCTTTTCTACTCGCACAGCCTGCGCAGCTCCATCCGC
TCGGCAGGATGGAGGATCGACGAAGGGAACGCAACGCCACGGGCCGAGCT
GAGCTACCAGGCCAGGGTCACCGTCGGATGCACTCCAAATGCCAGCATTA
CCACTGGCGAATCGCCGGCGGCACCCAAGCCGCCCAGTGATCCGGAGCAA
TTGGAACTGTTGGGTGTGGTGCGCAACAAGCAGGACAAGTACATACGCGA
CATTGGCTACAAGCATCACGCCTTCAACGCGCTGGTGTCCAATAACATAG
GACTCTTCCGGGCGATCCCAGACACTCGGCACAAGGTGTGCGATCGCCAG
GAGACCACGGAAGCGGAAAATCTGCCCCAGGCCTCCATAGTCATGTGCTT
CTACAACGAGCACAAGATGACGCTGATGCGCTCGATTAAGACCGTGCTGG
AACGCACGCCCAGCTACCTGCTGCGCGAGATTATTCTGGTGGATGATCAC
AGCGATCTTCCAGAATTGGAATTCCATTTGCACGGGGATCTGCGTGCCCG
CCTGAAGTACGACAACCTGCGGTACATCAAAAACGAGCAGCGCGAGGGTC
TCATTCGTTCCCGGGTCATTGGTGCACGCGAGGCCGTGGGCGATGTGCTC
GTCTTCCTCGACTCGCATATCGAGGTCAATCAGCAGTGGCTGGAGCCGCT
GCTGCGCCTCATCAAGTCGGAGACGCCACTCTGGCCGTGCCCGTCATCGA
CCTGATCAACGCTGATACCTTTGAGTACACGCCCAGTCCACTGGTGCGCG
GAGGATTCACTGGGGCCTGCACTTCCGCTGGGAGATCTGCCCGAGGGCAC
GCTCAGGTGCCGGAGGATTTTCGCGACCCTCGTTCGCCCACCATGCGGCG
GATTGTTGCGTGAACAGAGTACTTCAGCATCTGGGCGAGTACGACTGCAT
GGATATATTGGGGTGCGGAAATAAGGATCTCCTC
UFO11720.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:23:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pgant35A-RA | 2160 | CG7480-RA | 128..1176 | 83..1115 | 4840 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:23:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14359379..14360405 | 83..1095 | 4560 | 98.5 | Plus |
Blast to na_te.dros performed 2014-11-28 03:23:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gtwin | 7411 | gtwin GTWIN 7411bp | 6682..6722 | 691..731 | 115 | 75.6 | Plus |
UFO11720.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-28 10:02:47 Download gff for
UFO11720.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pgant35A-RA | 153..1210 | 74..1115 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:49:56 Download gff for
UFO11720.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pgant35A-RA | 119..1176 | 74..1115 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:56:39 Download gff for
UFO11720.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pgant35A-RA | 119..1176 | 74..1115 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:56:39 Download gff for
UFO11720.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14359379..14360427 | 83..1115 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:49:56 Download gff for
UFO11720.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14359379..14360427 | 83..1115 | 98 | | Plus |
