UFO11724.5prime Sequence
577 bp (396 high quality bases) assembled on 2012-06-28
> UFO11724.5prime
TGAATAGGGAATTGGCCAATTCGTTAACAGATCTGCGGCCGCATAACTTC
GTATAGCATACATTATACGAAGTTATCAGTCGACATGTGTCTTAGGGTTT
TGTATGAAAAAATGATGTGCTGTTGTCCCAAGCTGAAAAAGGGAGGTTTG
AATGAGGCCTCATTTTACGAATATGCAGATGCTGTGCCAAAATATTTTAA
CGACCAAATAGGGAAATTGAGCGAAGGGATAAGTTTCACGGTGACTGGGA
ATCTCTCTGTAAACTGCGAGAGGTTTTCCATCAATCTGGTTTATAACAAT
GACTCTCGAGATGTGGCGCTCCACATTAATCCACGGTTGCCACAAAAACT
ATATTGTCCGCAACACCAAAGTACAGGACATTTGGGGAAAACGAGGAAGT
GTCCTCGGCCTTTGCCGTTTTCTACTAAGTCCGAGGCGAGGAATTTTTCC
ATTCCAGGTGGCTAGTTTCTGGAGGGCATGGCTATATGAAATCCGGTTAA
CCGGAACAACACTTTGCAGCCGTAAACCTCATCGAAACCCCTTAAAGGGA
TGTTTCGCGCTTTCTGGAAGTGGGAAG
UFO11724.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:23:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| galectin-RB | 1694 | CG11372-RB | 373..840 | 85..572 | 1810 | 93.9 | Plus |
| galectin-RF | 1536 | CG11372-RF | 285..682 | 155..572 | 1460 | 92.8 | Plus |
| galectin-RD | 1430 | CG11372-RD | 181..576 | 157..572 | 1450 | 92.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:23:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 75076..75247 | 271..447 | 605 | 96 | Plus |
| 2L | 23513712 | 2L | 74901..75020 | 155..274 | 600 | 100 | Plus |
| 2L | 23513712 | 2L | 74501..74573 | 85..157 | 365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:23:17 has no hits.
UFO11724.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-28 10:02:43 Download gff for
UFO11724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| galectin-RB | 12..459 | 79..544 | 93 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:49:43 Download gff for
UFO11724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| galectin-RB | 368..815 | 79..544 | 93 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:56:27 Download gff for
UFO11724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| galectin-RB | 368..815 | 79..544 | 93 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:56:27 Download gff for
UFO11724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 74496..74572 | 79..156 | 96 | -> | Plus |
| 2L | 74903..75018 | 157..272 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:49:43 Download gff for
UFO11724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 74496..74572 | 79..156 | 96 | -> | Plus |
| arm_2L | 74903..75018 | 157..272 | 100 | -> | Plus |
