UFO11729.5prime Sequence
1097 bp (938 high quality bases) assembled on 2012-06-28
> UFO11729.5prime
GAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTATAGCAT
ACATTATACGAAGTTATCAGTCGACATGAACAAATACTCGGCATTTATAG
TCTGCATTTCGCTCGTGCTTTTATTTACAAAAAAGGATGTGGGGAGCCAT
AATGTGGACTCAAGAATATATGGTTTCCAGCAATCATCAGGTATTTGCCA
TATTTACAATGGCACCATTTGTCGCGATGTCTTGAGCAATGCCCATGTTT
TCGTATCCCCCAATCTCACCATGAACGATTTGGAGGAGCGATTAAAGGCA
GCTTATGGAGTAATCAAGGAATCCAAGGATATGAACGCAAATTGCCGCAT
GTACGCTTTGCCCAGCTTGTGTTTCAGTTCAATGCCAATTTGCCGGACTC
CAGAGCGCACGAATCTCTTGTACTTCGCCAACGTGGCCACAAATGCCAAG
CAACTGAAGAACGTCAGCATTCGACGGAAGAGAACCAAGTCCAAGGACAT
TAAGAACATAAGCATATTCAAGAAGAAGTCCACCATCTACGAGGATGTGT
TCAGCACAGACATATCGAGTAAATACCCACCAACCAGAGAGTCTGAGAAC
CTAAAACGCATTTGCCGCGAAGAGTGCGAACTTCTGGAGAACGAGCTGTG
CCAGAAGGAATATGCCATTGCCAAAGCGACATCCCGTCATCGGGATGGTG
GGTGTGGAGGATTGCCAAAAGTTGCCGCAGCACAAGGACTGCCTATCCTT
GGGCATCACCATCGAGGTGGATAAGACGGAGAATTGTTACTGGGAAGGAT
GGATCGACATATAGAGGAGTGCCAACGTCTCCGCATCCGGAAAGCCATGT
TTGCGATGGTCATGGCTGATGAAGAAATCTCCGATTTCCCTGAACTCATC
GGTCAGATTAGTGCAGAATCCTGAAGCGTTGAGATAGTCCTTGTGTTTGT
GACTCTCACGTGAACGCATATCGAACTTTGTGATATCAAATGTGCGGACA
AATATGGATTGCATTGTCGACGACTGCAGCCATATCTAATATCATACTAT
ATTTGCGATATACTTTCAAAGAGAACATCTGCACTATGGATGAGAAT
UFO11729.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:24:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ror-RA | 2271 | CG4926-RA | 125..1165 | 76..1090 | 4450 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:24:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10252484..10253064 | 327..907 | 2715 | 99.3 | Plus |
2L | 23513712 | 2L | 10252274..10252428 | 173..327 | 775 | 100 | Plus |
2L | 23513712 | 2L | 10251967..10252064 | 76..173 | 490 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 03:24:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\Vege | 884 | Dwil\Vege VEGE 884bp Derived from AF518730. | 505..586 | 995..915 | 119 | 63.9 | Minus |
UFO11729.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-28 10:02:52 Download gff for
UFO11729.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ror-RA | 121..1155 | 64..1077 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:50:13 Download gff for
UFO11729.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ror-RA | 116..1150 | 64..1077 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:56:52 Download gff for
UFO11729.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ror-RA | 116..1150 | 64..1077 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:56:52 Download gff for
UFO11729.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10251967..10252064 | 76..173 | 100 | -> | Plus |
2L | 10252275..10252427 | 174..326 | 100 | -> | Plus |
2L | 10252484..10253074 | 327..916 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:50:13 Download gff for
UFO11729.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10251967..10252064 | 76..173 | 100 | -> | Plus |
arm_2L | 10252275..10252427 | 174..326 | 100 | -> | Plus |
arm_2L | 10252484..10253074 | 327..916 | 98 | -> | Plus |