UFO11732.5prime Sequence
1121 bp (1028 high quality bases) assembled on 2012-06-28
> UFO11732.5prime
TGAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCG
TATAGCATACATTATACGAAGTTATCAGTCGACATGATCCGGCTTAATTG
GCTATTCAGGAGCTCCTCGGTGCTGCTGCGCAGCCAGGTGCGACTGCTCC
ATGTGGGAGATGCCAATGTTTTGCATAGCGAGGTAGACAAGCAGTCCGCC
GAGTACAAGGAAAATGCCAGAGAGATGGCCAGTTTGGTTGGAGATCTGCG
GAACTTCACCAGCCAGGTGCTCAAGGGAGGCGGACAAAAGGCCATCGAGC
GACACACATCGCGGGGTAAACTCTTAGCCAGGGAGCGCATCAACCTGCTC
CTGGATAAAGGATCGCCCTTCCTAGAACTCAGTGCTTTGGCCGGACACGA
GTTATATGGCGAAGAGGTGGTCAACTCCGGGGGAATCGTCACCGGAGTGG
GACGCGTTTGCGGAACTGAGTGTTTGGTGGTGGCCAACGATGCCACTGTG
AAGGGTGGAAGCTACTATCCCATTACCGTTAAGAAGCATTTGCGCGCTCA
GGAGATTGCCCAAGAAAACCGCTTGCCCTGCATTTACCTTGTGGACTCGG
GTGGCGCCAACCTTCCGCGCCAGGCGGATGTCTTTCCAGACAAACTGCAC
TTCGGACGCATCTTCTACAACCAGGCAAACATGTCGGCCCAGGGAATTCC
TCAGATTGCTGTAGTTATGGGCAGCTGCACGGCCGGAGGAGCTTACGTAC
CGGCAATGGCCGATGAGAGCATCATTGTTAAGAAGCAGGAACTATATTTC
TTGCTGGGCCGCCGCTGGTGAAGGCGGCCACTGGAGAGGAAGTGTCTGCG
GAAGATTTGGGTGGAGCAGACTTGCACTGCAGACTTCTGGGGTCACCGAC
CACTATGCCTTAGACGACGAACACGCCTTGTATCTGGCCCGCAGATGTGA
GCACTAAACTGTCGCACTAATCGTACACGATCAGCTGATGCACTCAGTCA
GTCATTTCCAGACTGCTACTCGCGTCTGCGTAAAAGACCGCGCTACGACC
GAGGGCTGTACGCATCGTAGTCATCTTACAAGCTTTGACGTCCAGGGATG
GCCCGCATCGTCCACGGAGTC
UFO11732.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:24:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3267-RA | 2141 | CG3267-RA | 105..1172 | 84..1118 | 4495 | 96.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:24:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6747242..6747723 | 463..942 | 2310 | 99.6 | Plus |
| 2R | 25286936 | 2R | 6746668..6746923 | 208..463 | 1280 | 100 | Plus |
| 2R | 25286936 | 2R | 6746485..6746611 | 84..210 | 635 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:24:19 has no hits.
UFO11732.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-28 10:02:53 Download gff for
UFO11732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3267-RA | 95..1145 | 76..1101 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:50:17 Download gff for
UFO11732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3267-RA | 99..1149 | 76..1101 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:56:56 Download gff for
UFO11732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3267-RA | 99..1149 | 76..1101 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:56:56 Download gff for
UFO11732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6746479..6746610 | 76..209 | 97 | -> | Plus |
| 2R | 6746670..6746923 | 210..463 | 100 | -> | Plus |
| 2R | 6747243..6747857 | 464..1057 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:50:17 Download gff for
UFO11732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2633984..2634115 | 76..209 | 97 | -> | Plus |
| arm_2R | 2634175..2634428 | 210..463 | 100 | -> | Plus |
| arm_2R | 2634748..2635362 | 464..1057 | 96 | -> | Plus |
