UFO11737.5prime Sequence
646 bp (493 high quality bases) assembled on 2012-06-28
> UFO11737.5prime
GAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGT
ATAGCATACATTATACGAAGTTATCAGTCGACATGTCCGGCAATCAACAG
CAGCAGCAACAGCAACAGAAGTCATTAACTAACAACGCGGCAGCAGCAGC
AACAAACGAAGCAACCACTTTGGGCCATAATTTGATAAAAATAAATAGCG
TTGACAAAATAGTAGGCAAAAGTCAGGCAGCAACGCAGGCAATTAACAAA
CTACAGCAGCAGCAGCAGCAGCAGCACCAACAACAACAAATCCACCAGCG
TCGCTCATTGCTGCCAGCAACAGGAGGAGCAACGAATCCCCACCAGCCAC
ACTCATCGCAGCAACAAAGCGGAACGCCAACGCCAACAGCTCAGTCGGCA
GCCCAAAAACAGCAGCAGCAGCAGCAACAATCACATCAATTGCAGACGGT
GGCCACGATACACCAGCCGCACTCCACGCAGCAGCAAGCATTGACTTTCC
CGCCTGCCCATCCAGCAACAATCGACTAAAGGAATTTGCCCAATCTAGCC
GGCCAGCAGGGCCGCAAGCTTCCACTACCAGTTGCAAAATCAGCAGCAAT
CTCTGCGCAACCCGGCAGCTGAAAGGGACCGGCACCCGCCCACTTC
UFO11737.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:24:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17265-RA | 3261 | CG17265-RA | 831..1386 | 83..644 | 2585 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:24:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3013502..3014057 | 83..644 | 2455 | 97.9 | Plus |
Blast to na_te.dros performed 2014-11-28 03:24:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2294..2661 | 238..603 | 355 | 60.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2297..2531 | 207..445 | 302 | 63.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2792 | 95..599 | 278 | 57.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2363..2535 | 216..390 | 247 | 66.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2615..2994 | 78..495 | 246 | 59.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2796..2999 | 88..298 | 229 | 62.2 | Plus |
| BS | 5142 | BS BS 5142bp | 2041..2104 | 265..332 | 141 | 72.1 | Plus |
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3291..3336 | 251..296 | 113 | 71.7 | Plus |
UFO11737.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-28 10:02:55 Download gff for
UFO11737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17265-RA | 2..558 | 83..646 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:50:23 Download gff for
UFO11737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17265-RA | 824..1387 | 75..646 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:57:00 Download gff for
UFO11737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17265-RA | 824..1387 | 75..646 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:57:00 Download gff for
UFO11737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3013495..3014058 | 75..646 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:50:23 Download gff for
UFO11737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3013495..3014058 | 75..646 | 97 | | Plus |
