UFO11738.5prime Sequence
1094 bp (1023 high quality bases) assembled on 2012-06-28
> UFO11738.5prime
GAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGT
ATAGCATACATTATACGAAGTTATCAGTCGACATGGCACGCAAGAGCCAC
ATGTACAACGCAATACCCGCCGGCTTTGAGTCGGACGAGGAGAACATGGA
GAACCTAATGAGCAACCTGAAGATCAAGCGCTTGGAGGACATCACGACAG
GTGCTGGAATCGACGGCTGTAACTTTGACGCCACCTTGGACGCAAAGGCG
GAGGAGTTTTTTAAGCTGTTCCGCGAGAAGTGGAACATGTATAGCAAGAA
AAAGTCGCCACATCTGCGCCAGGAATTTGGAAGGGCTTTAATGGGCCATC
AGGATCCTTTGCTCCTGGCCCTGAAGATCTTCGCCAACTGCCCAGACAGC
AGCAACATCAAGACGAAGAGCTTGTCACATTTTGTGCTGGACACGGTTTG
CAAGCTCCACAAGGATTTCCCGCATCTTGGCGAGGGCTGTGATCCCAACA
CCAGCATGATAGCCTTTAACTTTGTCAAGACCTCCGGCTTGCTGGCCCTC
AACAATGCTGTTATCCATGCCTACAGTCTACGTCAGATCCGCGACCTACT
GCTTCCCAAGTTGCGCGAACTCCTGGACAACGGGCTTTACAAAGAGGTCA
CCCAATGGTCCATCAGTCTGCAGTTGACGCACGAGTTCGACATGCTGGAA
CTGGCTTTCCCGCTGATTGCAATTGAGAAACTACCACTGGCCGAGGAATA
TCTGGACCATGCCACACAGCAGAGGTTGCCCTTTGTCAAGTTCTTGGATT
CGTTGCTGCACAAGGAGAAGTCGGTTTTAGAGCTCTGCGAGCATCTACTC
GATCGGTACAAAAATCTCAAAATTTCCCATAACGTGCTCAGCTATCGGCC
TATGGCCAAGATTGTGGCGCGACTGGCCAGAAGTATGGTTTTGACGACGC
GTCACGCCCACTATAGTTCACGAGACGTGCAGCTACTGCATTACCTTTAC
CGCGAGTACGAAAAGACGCGCATGACTGTCAGTTTCGGGAGGTGTGGCGT
CATGGCTTTACACGGCTGCCCACGACTCGTAGATTGCTCTGCTG
UFO11738.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:24:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nbr-RA | 2335 | CG9247-RA | 82..1089 | 83..1074 | 4600 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:24:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21162233..21163002 | 852..83 | 3850 | 100 | Minus |
| 2L | 23513712 | 2L | 21161999..21162177 | 1025..853 | 580 | 96.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:24:35 has no hits.
UFO11738.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-28 10:02:56 Download gff for
UFO11738.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9247-RA | 83..1048 | 80..1036 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:50:25 Download gff for
UFO11738.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nbr-RA | 79..1044 | 80..1036 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:57:02 Download gff for
UFO11738.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nbr-RA | 79..1044 | 80..1036 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:57:02 Download gff for
UFO11738.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21161985..21162177 | 853..1036 | 94 | <- | Minus |
| 2L | 21162233..21163005 | 80..852 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:50:25 Download gff for
UFO11738.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21161985..21162177 | 853..1036 | 94 | <- | Minus |
| arm_2L | 21162233..21163005 | 80..852 | 99 | | Minus |
