UFO11744.5prime Sequence
1098 bp (1002 high quality bases) assembled on 2012-06-28
> UFO11744.5prime
AATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTA
TAGCATACATTATACGAAGTTATCAGTCGACATGGCTACGCTACGGAACC
ACCTATCGGCGGGCGGGGGGTTGAACCACAGCGGCCCGGACTCGCCACAG
GAGCCGCAGGACGCGGGCGCCACGCTGGCCATCGGCTATGTGCGGGAGTT
CAGGATGCGCGTGGCCTGCTTCCAGGTGCAGCGCTCCGAGGAATCGCTGG
TGTACGTGCAGCGCAGCGTTGCGCTGCTAGGCACCAAGGTGCTGCCGGCG
CACTTTGCCCCCACGCCAGGCAACCTGGAGCTGGCCCGCTTCTATGTGGA
TCTCTACGCGCTGATGGGCGCGCTGAAGAACGAGGGTGCCGAGGGCGATG
TGCTGTGGGCCTGCGTTGGACTGGTGCAGCACTGCTCACGGAATCTGGAG
GCCCGCCAGGCGGTCGTCGAGCATTTCTGCTTTGTGCCGCTGCTGGGAGT
GCTCATAAGGCATACCAAACGAACGGAACGGGTGCACCGGCTGCTGGTGC
TGCTGCAGGACCTTACATACGGCATAAAAATCGCCTGGGAGGAGCCCTTC
CTGGCTGCGCTGATCGAGCATCTGGTGGGGATCGTACTGTGTACGGAAGA
CGTCTCCTGCACTGCGAGTGGTGGGTCCGTTCGCGACGACGACGACGAAA
ATACAATGCTCGCCCTCTCCGTGCTGGTGAACCTTTGCTACAAGAACTTC
GCCGTGCTGTTCCTCTTTCTGCGCAGCGTCAACATATCCGCCTTTTGCCG
GCGCATCCAGAACTACGGCCTGCTGGCGTACAAATGCTAATCATCCTCTC
GGAGGACGTCTACTCCTTCCAGCAGTCCGAGCTGTGCACCTTCCTGCGCC
TGTCGTTCGCGGCATCGAGGACTGCCTGAAGCACTGGAACGTCGCCAGCT
GCGGCATATCGTGACTTCCTCTTGACTCGCAGAGCCACCCCGGCTGCATA
GGGCGATGTGTCGCACGTCATTTCGGGGAGGATTTCAGAGCTGCTGACCA
ATCGACCTAGCAACGCATGACGGTTCGCAGGAGAACGAGCAGCCACAT
UFO11744.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:24:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12702-RB | 3353 | CG12702-RB | 543..1559 | 82..1083 | 4650 | 98.1 | Plus |
| CG12702-RC | 3461 | CG12702-RC | 651..1667 | 82..1083 | 4650 | 98.1 | Plus |
| CG12702-RA | 2896 | CG12702-RA | 86..1102 | 82..1083 | 4650 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:24:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19761300..19762233 | 1009..82 | 4370 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:24:58 has no hits.
UFO11744.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-28 10:03:00 Download gff for
UFO11744.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12702-RA | 81..1065 | 71..1046 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:50:39 Download gff for
UFO11744.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12702-RA | 76..1060 | 71..1046 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:57:13 Download gff for
UFO11744.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12702-RA | 76..1060 | 71..1046 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:57:13 Download gff for
UFO11744.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19761300..19762243 | 71..1009 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:50:39 Download gff for
UFO11744.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19655333..19656276 | 71..1009 | 98 | | Minus |
