UFO11751.5prime Sequence
1102 bp (1005 high quality bases) assembled on 2012-06-28
> UFO11751.5prime
AATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTA
TAGCATACATTATACGAAGTTATCAGTCGACATGAGTTTTCTGGATGACA
ATAATGCCTGTGGGCAGAATCTGCTGAATATAGTGTCGGTGGGTAATTCT
ATAATAGCAGAGATCCTGCGCCTCAAGGACTACGTGCCCAGTATTTATAG
ATTGGACAACAAAGCTGATAAGGCGAAATATGGCGAGCTTATTCTGGATT
TCAGCTACTTCAAGATAGCCGAAGATCACGAGAGGAGGATCGAACAAAGT
CCGGAACTGACCGAACTCGATGATGAGGCACGTGCCCAGCTTCCGCTAAT
CACACGATTTTACCTGGCCTTCCAGAGCATCCATCACTATGCCTCCGATC
TCCAGCAATATATCGAGGAATTGAACACTGGCTACTATATCCAGCAGACG
CTGGAGACGGTACTTCAGGAGGAGGAGGGCCGCCAACTGCTCTGCGAATC
CCTGTATCTCTTTGGTGTGATTCTCCTCATGGTCGATTTTCACATTCCGG
GGGATGTGAGAGAACGTCTGCTGATCGCCTACTATCGGTATAGTGGAGGA
GATGCAACGCCTAGCGGAGACGAGAGTAATATCCATGATGTTTGTCTCCT
GCTCCGATCTACGGGCTATGTTCATCCGTCGATTGCCGCTAAAGTGCTCG
GTTTGGGTGGCAAACAGGCAGGCGCTAGAGCTGCTAGCCTTGTGGTTCCC
CGATACCCGGAGGCCTACTTCTCTCGCTTCCGTTTCGATGAGAATTTCGT
GGATCTAGTGGTGGCTCGTCTGCGGTGCGATGATATATACAACCAACTGA
ACCTGTATCCACATCCTGCCCATCGCTCCACGGCTCTGTCTACTCAGCGG
CCATGCTGTATGTGTGCTTGTATTTCTGCCCGCAAGTTCTTCATTCCCAG
CTCACAGATGCGCGAAATTGGTGGACAAGTTCTTTTTGCGACACTGGACC
ATATCCGTGTACATGGGCATGAACAGTGATTCTGTTGATGCTATGATTCA
AGCGTCGATCTGCTATGAAATGTGAAAGTCACGCATCAGCATTTGTCAGC
AG
UFO11751.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:25:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12272-RB | 3814 | CG12272-RB | 186..1139 | 82..1034 | 4605 | 99.2 | Plus |
| CG12272-RA | 3762 | CG12272-RA | 134..1087 | 82..1034 | 4605 | 99.2 | Plus |
| CG12272-RC | 3690 | CG12272-RC | 355..1015 | 375..1034 | 3140 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:25:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16122523..16123244 | 303..1022 | 3360 | 98.6 | Plus |
| 3L | 28110227 | 3L | 16122187..16122305 | 82..200 | 595 | 100 | Plus |
| 3L | 28110227 | 3L | 16122360..16122465 | 199..304 | 530 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:25:12 has no hits.
UFO11751.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-28 10:03:02 Download gff for
UFO11751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12272-RB | 162..1177 | 74..1080 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:50:47 Download gff for
UFO11751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12272-RA | 130..1145 | 74..1080 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:57:20 Download gff for
UFO11751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12272-RA | 130..1145 | 74..1080 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:57:20 Download gff for
UFO11751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16122183..16122305 | 74..200 | 96 | -> | Plus |
| 3L | 16122362..16122464 | 201..303 | 100 | -> | Plus |
| 3L | 16122524..16123313 | 304..1080 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:50:47 Download gff for
UFO11751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16115283..16115405 | 74..200 | 96 | -> | Plus |
| arm_3L | 16115462..16115564 | 201..303 | 100 | -> | Plus |
| arm_3L | 16115624..16116413 | 304..1080 | 97 | | Plus |
