UFO11755.5prime Sequence
1121 bp (1017 high quality bases) assembled on 2012-06-28
> UFO11755.5prime
TCTGAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTT
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCAAAGAATTAT
TGGGGGTTTTTCCTTTTCTGTTTAGCCCTTGGATTAATGCTGAATTTGAG
TCAGCAGGCTTCACTTTTCAAGAGAGATTTCTATACAGCTGGTGTGGTGG
AGTTTGAGCCATCCAATGAATTGTCCGACAATCTAGCTGGCTATTTGGAG
ATAATCCAGTCGCAGAATGCCACTTCTACGGACATCATTGTGTTCCCCGA
GAGCACACTGAACTCCGCGGGTTCCACGACCTTTGTGCCCAATCCCGAGG
ATCAGATAAACCCCTGTTTGAGTGATCCCAATGCCACCTACTATGAGGAG
TTTCTGGTGACCCTGTCGTGTGCGGCCCGCAATGCCAGTAAATACATTGT
GATCAATCTGACCGAGAAGCAGAAGTGCGAGGATATTCCCGAGGATACGA
GGCCATGTGCATCTAACGGACTGAATGTTTTCAACACCAATGTAGTGTTC
GATCGTCAGGGAGTGGTGGTGTCCAGGTACCGAAAGGTTCATCTCTATGG
TGAGCCCAAGAACAGCACTTTTCTGCCGGAACTGAGCACCTTCGAGACAG
ACTTTGGGGTCACCTTCGGTCATTTTATCTGTTTCGACATCCTGTTCTAT
ACTCCCGCCCATCAACTCATCGTGGAGCAGGGTATTACGGACTTCGTGTA
TCCGGCCATGTGGTTCTCCCAACTGCCCTTCCTCACAGCTGTTCAAATTC
AGCTGGGTTGGTCCTATGCCAACAATGTGAATTTGCTGGCTGCTGGAGCA
AGTGATCCCATTGTTGGAATAGTGGATCGGGCATTTATCACGGACGCAGT
GCTCACTAAGAAGTGTGATGCGCAGAGTCCGTGAGAGAGTATATATGTGC
CCGGGTACCCAATACAGGCCAAAAGCGGATGAGCGAGATCTCAACGTCAG
TGCCACCAGTCAAGTTTCCACATCAACGGGATATCTGGAACTTCACAGCG
AGGAGCCTGAATTCGAGCCTGAAGATCGTATCTTAGCCGAATCTGGTCAC
GTGGCTTCTGTTGTCCATTCG
UFO11755.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:25:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32751-RA | 1603 | CG32751-RA | 35..1093 | 84..1115 | 4535 | 96.9 | Plus |
| CG32751-RB | 1758 | CG32751-RB | 35..1117 | 84..1115 | 4285 | 94.7 | Plus |
| vanin-like-RA | 1864 | CG32754-RA | 180..841 | 236..896 | 2565 | 92.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:25:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6197860..6198493 | 788..155 | 3170 | 100 | Minus |
| X | 23542271 | X | 6201766..6202316 | 786..236 | 2350 | 95.1 | Minus |
| X | 23542271 | X | 6197492..6197629 | 922..787 | 590 | 98.6 | Minus |
| X | 23542271 | X | 6198546..6198620 | 158..84 | 375 | 100 | Minus |
| X | 23542271 | X | 6201274..6201387 | 896..784 | 220 | 81.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:25:22 has no hits.
UFO11755.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-28 10:03:04 Download gff for
UFO11755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32751-RA | 35..1099 | 84..1121 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:50:53 Download gff for
UFO11755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32751-RA | 35..1099 | 84..1121 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:57:26 Download gff for
UFO11755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32751-RA | 35..1099 | 84..1121 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:57:26 Download gff for
UFO11755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6197860..6198490 | 158..788 | 100 | <- | Minus |
| X | 6198547..6198620 | 84..157 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:50:53 Download gff for
UFO11755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6091893..6092523 | 158..788 | 100 | <- | Minus |
| arm_X | 6092580..6092653 | 84..157 | 100 | | Minus |
