UFO11761.5prime Sequence
1059 bp (945 high quality bases) assembled on 2012-06-28
> UFO11761.5prime
GAATAGGGAATTGGCCAATTCGTTAACAGATCTGCGGCCGCATAACTTCG
TATAGCATACATTATACGAAGTTATCAGTCGACATGCGTTTGCTCATGGT
AATTGCAATTTTAATATTCGCAATGCCAATGACTGGATTCGGCTGGGCGG
AGGGCACCAACATCCTTCTCGATCCAAATCTAATGTGCAAAAAGACACGT
CGTCTGCGCGGCAAGTTGGCCGAAATCTGTCGGCACGATTCGGCCCTGCT
CAAAGAGATCATCATCAATGGCATCAACCTGGGCTTCCGCGAATGCGAGT
TTCAATTCCGCAACCGCCGGTGGAACTGCACTGTTCTGCGCAAGAGCATG
AGGAAAATCTTAATGCGCGATTCCCGAGAGACGGGTTTCGTGAACGCGAT
CACAGCCGCGGGAGTGACCTACGCCGTGACGAAGGCCTGCACGATGGGCC
AGCTGGTGGAGTGCTCCTGCGACAAGGCGCATATGCGCAGAAACGGCGGC
CAGCCACAGATGGTGACGGCGGCCACCGCAGAGGCGGCACTGGAGCGGCA
GCAACAGGCGGCGATGCTGCGACAACAAATGCCGCTGCAGGATCAACATC
CCAGTCAGCGGCTGAGTCGCATGAACAACGCCAGCACCATGACCGATATA
GCTCCAGTGGAGCATAGAGGCGGGCGAAATCGCAGCCCGGCGGAACGCGG
GGGCGCCGCAAGTTCTGGGACAACATTAAGTTTCCCGAGGGGCAGTGGGA
GTGGGGCGGATGCAGTGACAACGTTAACTTTGGGCCTTCGTCACTCGCGC
GTTTTCCTTGACGCCAAGCAAAGGCAAAGGCGTAGCGATCTGGGCACGCT
GGTTAAGTTCCACATATACGCAGTCGATTGTCATTCGCGATGCCATGCGC
TGAGTGCAGTGTCACGGGCTTTCGGCTCTGCACGTGAAGACTGCTGCTGA
GATGCTCGTTCGAGATGCAGACGACTGCAGACCGTATGACGTGCTAGAGT
GACGTGCGCAACGACTGAACGCCTCATGCGAAGTCGCACGCAAGGCAGCG
ACAGTACAG
UFO11761.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:25:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wnt6-RC | 2837 | CG4969-RC | 1322..2333 | 75..1051 | 4065 | 95.7 | Plus |
| Wnt6-RB | 2855 | CG4969-RB | 1322..2333 | 75..1051 | 4065 | 95.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:25:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7351182..7351677 | 369..864 | 2370 | 99.4 | Plus |
| 2L | 23513712 | 2L | 7342836..7343060 | 145..369 | 1125 | 100 | Plus |
| 2L | 23513712 | 2L | 7335035..7335106 | 75..146 | 330 | 97.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:25:36 has no hits.
UFO11761.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-28 10:03:07 Download gff for
UFO11761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt6-RB | 235..1129 | 75..955 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:51:04 Download gff for
UFO11761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt6-RB | 1322..2216 | 75..955 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:57:34 Download gff for
UFO11761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt6-RB | 1322..2216 | 75..955 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:57:34 Download gff for
UFO11761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7342837..7343060 | 146..369 | 100 | -> | Plus |
| 2L | 7351183..7351697 | 370..880 | 98 | -> | Plus |
| 2L | 7335035..7335105 | 75..145 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:51:04 Download gff for
UFO11761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7335035..7335105 | 75..145 | 97 | -> | Plus |
| arm_2L | 7342837..7343060 | 146..369 | 100 | -> | Plus |
| arm_2L | 7351183..7351697 | 370..880 | 98 | -> | Plus |
