UFO11762.5prime Sequence
1123 bp (1007 high quality bases) assembled on 2012-06-28
> UFO11762.5prime
GAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGT
ATAGCATACATTATACGAAGTTATCAGTCGACATGGGGCAAGGAGCTAGA
CGAATATTGCGGGCGTCCCGCTCGCAGATTTGCGGTAGTCTTCGAACGGG
CGAAGGGTCCAGCACCTCAGCAAGTTGTCGAAAAGTGGTAAAAAACCCAG
CTGGATTGTCCGAATTTGACCAGTGCTCGATGCTTTGGCCGTTCGCAGTC
TGCCGCATTCCTGCTAGGCGTCCCACCCGCCCAGGATTCCTCAACCCAGG
GCCATTGGGAGAGGATCCGTCGCTAACAGAAGCAAGCTTTCTAGACCATT
CGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCAT
AATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGG
ATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAT
CCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGC
GAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTT
GTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGA
TGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATA
TTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGT
TTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAAC
ATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACA
CGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGT
ATTCACTCCAGAGCGATGAAACGTTTCAGTTTGCTCATGGAAAACGGTGT
AACACGGTGACCACTATCCCATATCACCAGCTCACGTCTTTCATGCCATA
CGAAATTCCGATGACATTCATCAGCGGTCAGATGTGAATAAGCGATTAAA
CCTTGTGCTATTTTTCTTACGTCTTAAAAAGCGTAATTCACTGACGTCTG
GTTAAGGTACTGACACTGACTGA
UFO11762.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:25:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rrp47-RB | 1285 | CG8928-RB | 1132..1189 | 178..121 | 230 | 93.1 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:25:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15836523..15836670 | 184..331 | 740 | 100 | Plus |
| X | 23542271 | X | 15836295..15836397 | 83..185 | 515 | 100 | Plus |
| X | 23542271 | X | 15946096..15946153 | 178..121 | 230 | 93.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:25:39 has no hits.
UFO11762.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-28 10:03:07 Download gff for
UFO11762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32582-RB | 127..388 | 76..343 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:51:06 Download gff for
UFO11762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32582-RB | 105..366 | 76..343 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 03:57:34 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:57:34 Download gff for
UFO11762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15836292..15836397 | 76..185 | 96 | -> | Plus |
| X | 15836525..15836674 | 186..336 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:51:06 Download gff for
UFO11762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15730325..15730430 | 76..185 | 96 | -> | Plus |
| arm_X | 15730558..15730707 | 186..336 | 98 | == | Plus |
