UFO11763.5prime Sequence
1113 bp (1006 high quality bases) assembled on 2012-06-28
> UFO11763.5prime
GGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTATAGCA
TACATTATACGAAGTTATCAGTCGACATGAGCCAATACGACAATCCGTTT
AAGATTATCCTCCTGGGTGACAGCGGCGTAGGCAAAACCTGCCTGCTGAT
GCGTTTCTCGGATAACCAATTCACCACAAGACACCGGAGCACTGTGGGCT
TGGATAGAAGGGAGTGCAGCGTGGAGTTTGCCGATTGGAGGATGGGGAGG
ATGCTGCAAGTCTGGGACACCTCCGACGACGAGCGCTTCAAATTGCTGAA
GGCGACCCAATGTCGCAGTGCCCATGGCATACTGCTCGTCTACGACATAA
CGTCGTCCAAAAGTTTCCAAAACATCGATGGCTGGATGAAGGAGATACGG
CGCCTGTGTCCGGATAAGGTAATTGTCCTGCTGGTGGGCAACAAAAGTGA
TGATCCGAACCATCGCCAGGTGAGCATGGCGCAGGGGTTCAACTATGCCC
ATCGTCAGTCAATCTGCTTTGAAGAGGTTTCCGCCAAGAGTGGAAGGAAT
GTATATGACATATTTAGCTCGTTGGCAATGGACATATATACATATCGTCG
TGTACATTACAACCCGTTCAGCTTGACATCTTGGCAGGAAGAGGAGGACG
CTGCAGAGTCACTGGATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGG
GCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAA
CTAGCCTAGAGATCCTGGTCATGACTAGTGCTTGTATTCTCACCAATAAA
AAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTG
AGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAA
TTACGCCCCGCCCTGCACTCATCGCAGTACTGTTGTATTTCATTAGCATT
CTGCCGACATGCAGCATCACAAACGGCATGATGACTGATCGCAGCGCATC
AGCACCTTGTCGCTTTGCGTTTATATTTGCCATGTGAAACGGGGCGAGAG
TGGTCATATTGCACGTTATCAACTGTGAACTCACCAGGAATGCTGAAACG
AAACCATTTCCAA
UFO11763.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:25:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rab9D-RA | 897 | CG32678-RA | 94..684 | 77..667 | 2955 | 100 | Plus |
| Rab9E-RA | 889 | CG32673-RA | 86..676 | 77..667 | 2880 | 99.2 | Plus |
| Rab9Fa-RA | 871 | CG32671-RA | 68..658 | 77..667 | 2880 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:25:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10589182..10589772 | 77..667 | 2955 | 100 | Plus |
| X | 23542271 | X | 10661168..10661758 | 667..77 | 2880 | 99.2 | Minus |
| X | 23542271 | X | 10950373..10950963 | 667..77 | 2880 | 99.2 | Minus |
| X | 23542271 | X | 10622568..10623158 | 667..77 | 2805 | 98.3 | Minus |
| X | 23542271 | X | 10417496..10418080 | 77..667 | 1620 | 86 | Plus |
| X | 23542271 | X | 10951938..10952419 | 564..77 | 1070 | 81.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:25:42 has no hits.
UFO11763.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-28 10:03:08 Download gff for
UFO11763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab9D-RA | 94..687 | 77..671 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:51:08 Download gff for
UFO11763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab9D-RA | 94..687 | 77..671 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:57:37 Download gff for
UFO11763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab9D-RA | 94..687 | 77..671 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:57:37 Download gff for
UFO11763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10589182..10589775 | 77..671 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:51:08 Download gff for
UFO11763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10483215..10483808 | 77..671 | 99 | == | Plus |
