UFO11766.5prime Sequence
1110 bp (1005 high quality bases) assembled on 2012-06-28
> UFO11766.5prime
TGAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCG
TATAGCATACATTATACGAAGTTATCAGTCGACATGCGTCCTATTCTTGC
GCTATCCCTGGCCGTCCTGGCCACGCTGGTTGTCCTGTCCTCGCAGGCAA
CCTCAACATCGCCCACGAGTAGCTCTTCCACTTCGCCGACGAGTAGCTCT
TCCACTTCGCCCACGAGCAGTTCCTCCACCTCGCCAACGAGCAGTTCCTC
CTCATCGGACACAACGGCCACTACCACGACCACAACTGCCGCGACCACCA
CCACCACAAGCACAACTGAGGAGTCCAAGAAGAAACATCGCCGCAGGCAC
CGCCGCCGGAGGATCATCATCATCCGACGCGTTGGCGGTGGATTAAGGCG
CCGCAGAGAGCGCGACGGCGACGAGGATGGTGGCCGCGTCGTGAGGCGCA
TCCGTGTGCGCGAAGGAAGATTCAGGCGTCGTGATGCCTTCTTCGCAAGC
TTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCA
TAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCAT
GACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGC
GTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAA
CAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCA
TCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATC
ACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGC
CTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCC
ATATTGGCCACGTTTAATCAAAACTGGTGAAACTCACCCAGGATTGGCTG
AGACGAAAAACATATTTCTCAATAAACCTTTAGGAAATAGCCAGTTTTCA
CCGTTACACCGCCACATCTTGCGAATATATTGTGTAGAACTGCCGAAATC
GTTCTTGTAATTCACTCCAGAAGCGATGAAACGTTCAGTTTGCTCATGTA
AACGGGTTAC
UFO11766.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:25:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12522-RA | 498 | CG12522-RA | 29..439 | 84..494 | 2055 | 100 | Plus |
| CG32071-RA | 453 | CG32071-RA | 30..174 | 83..227 | 605 | 94.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:25:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11108263..11108673 | 84..494 | 2055 | 100 | Plus |
| 3L | 28110227 | 3L | 11103700..11103844 | 227..83 | 605 | 94.5 | Minus |
| 3L | 28110227 | 3L | 11108338..11108406 | 183..251 | 240 | 89.9 | Plus |
| 3L | 28110227 | 3L | 11108362..11108430 | 159..227 | 240 | 89.9 | Plus |
| 3L | 28110227 | 3L | 11103698..11103768 | 253..183 | 205 | 85.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:25:49 has no hits.
UFO11766.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-28 10:03:09 Download gff for
UFO11766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12522-RA | 1..414 | 84..498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:51:13 Download gff for
UFO11766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12522-RA | 22..442 | 77..498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:57:41 Download gff for
UFO11766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12522-RA | 22..442 | 77..498 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 03:57:41 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 21:51:13 has no hits.
