UFO11774.5prime Sequence
1140 bp (1034 high quality bases) assembled on 2012-06-28
> UFO11774.5prime
CTGAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTC
GTATAGCATACATTATACGAAGTTATCAGTCGACATGTACCAACGATTCG
CCAATTTGAATCTGGAGGCCCTCTATGGAATTCCGGCTATGTGTCCAGTG
ACCAATTGCCAGGCGCAGATGTCGCCACTCGAGATGCTGGCCCATCTGAT
GATGCGGCACAGTCCGCAGGACTCGATGATCGAGATTGCTGAGGACGTGC
CCAAGCAGTACGAAGTGGATATTGATAAATTGACACCGGGTCGAAATCAT
TCGATTGGAGTCATCGCCTATGAGGGAGCCCCAAAGCCGGGTCTTAGTTG
TGCTGTTACTTCGGATCTGCAGATTGTCCACCATCTGCCCATTATCCTGA
TGCTCTATGTGAGCCCTCCTATTCTGAACACCGAGCAGGCCTACATCTTA
TACCTGGTGAGTGCTGTGCCCTCCAGTCTGGTGAGTGCCAATGTAACACT
CCTCGACGGATTCCATGCCCACGAGAAGCGCGGATGGCGTTGCCTGCGCA
ATTCCCTGGACAGTCCATTGATGGATAGTCAGAATCGGCTGTATTGCAAC
ACGGACTACCTCCTGTACACGGCCACCGACATTCGGGAGCTGTGCCTCTC
CGGAGAGCAGCGTAGGATCTTCGTCAAGATCGTGCTACACGGCGAGCCCG
ATCCCTTCCAAGTGGACGCCGCAAGCTTTCTAGACCATTCGTTTGGCGCG
CGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCA
CAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAA
TAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGT
TCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATAT
CAAATTACGCCCCGCCTGCACTCATCGCAGTACTGTTGTATTCATTAAGC
ATTCTGCGACATGCAGCCATCACAACGCATGATGACTGATCGCAGCGCAT
CAGCATCTTGTCGCTGCGTATATATTGCCCATGGTGAACGGGGCGAGAGT
TGTCATATGTCCAGGTAATCAACTGCGAACCTCACCAGGA
UFO11774.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:26:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31848-RB | 816 | CG31848-RB | 93..728 | 85..720 | 3180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:26:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13265084..13265717 | 720..87 | 3170 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:26:06 has no hits.
UFO11774.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-28 10:03:12 Download gff for
UFO11774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31848-RB | 84..734 | 76..724 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:51:23 Download gff for
UFO11774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31848-RB | 84..734 | 76..724 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:57:48 Download gff for
UFO11774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31848-RB | 84..734 | 76..724 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:57:48 Download gff for
UFO11774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13265078..13265720 | 84..724 | 99 | == | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:51:23 Download gff for
UFO11774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13265078..13265720 | 84..724 | 99 | == | Minus |
