UFO11777.5prime Sequence
1116 bp (1022 high quality bases) assembled on 2012-06-28
> UFO11777.5prime
GAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGT
ATAGCATACATTATACGAAGTTATCAGTCGACATGCTGGCCCTTTTGCTG
ATTGCCGGTCAAGGTCAGGCGGCGCCGGTGAAGACCGAAGGTAGCACCTT
GGGCCTTCTGGGCGGTGGATTTGGTGGCAGTGTAGGACTTAGTGCCGGCA
TCGGAGTGGGTGGTGGCCTGTATAGCGGTTTCGGAGGCGGTGGCTATCCT
GGTGGCTATGCGAGTGGCTACCCAGGTGGCTATGGTGGTGGCTACTCAGG
CTATAACGGCTACGGAGGCAGTGGATTCGGAGGTGGCTACTATCCAGGAG
GAGGTTACTCCGGCTTTGGACACAGGCCGCATCACCACGGAGGATACTAT
CCGGGCGGTGGATCGTACCACAATCAGGGCGGATCTTATGGCGGCCACTA
TAGTCAGTCACAGTACTCGAATGGATATTACGGAGGTGGTGGCTATGGAG
GCGGTGGCTATGGAGGCAATGGCTTCTTTGGAAAGGCAAGCTTTCTAGAC
CATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAA
TCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGC
TTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAAC
AAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCC
AAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTAC
TGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGC
ATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTAT
AATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGTCA
CGTTTAAATCAAACTGGTGAAACTCACCCATGGATGCTGAAGACGAAAAA
CATATTCTCAATAAACCCTTTAGGAATAGCCAGTTTCACGTAACACGCCC
AATCTGCATTATGTGTAGAAACCTGCGATCGTCTGCTATTCACTCGACCG
ATGAACGTTTCAGTTT
UFO11777.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:26:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Edg91-RB | 546 | CG7539-RB | 12..464 | 83..535 | 2265 | 100 | Plus |
| Edg91-RA | 593 | CG7539-RA | 59..511 | 83..535 | 2265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:26:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17610938..17611390 | 535..83 | 2265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:26:12 has no hits.
UFO11777.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-28 10:03:14 Download gff for
UFO11777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Edg91-RB | 12..469 | 83..540 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:51:27 Download gff for
UFO11777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Edg91-RA | 53..516 | 76..540 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:57:52 Download gff for
UFO11777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Edg91-RA | 53..516 | 76..540 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 03:57:52 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 21:51:27 has no hits.
