UFO11779.5prime Sequence
932 bp (822 high quality bases) assembled on 2012-06-28
> UFO11779.5prime
CTGAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTC
GTATAGCATACATTATACGAAGTTATCAGTCGATATGAATCCCAACATGA
ACATGATGCCCATGTCTGGGCCACAAATGATGCAGGTAATGCAATCCTCG
CCATCGGGACCCCCAGGACCAGTGCAGCATCAACAGCAGCAGCCTCCACA
GCCACTGCAGCAGCAGCAGCAGGCCGAAAAATTGGACAACATTTCCAGGG
TGAAGAGTTTGCTGGGACCACTGCGGGAGTCCATGTTCCTCACCATCCGG
TCGAGCGCCTTCGCGCTGCAGCAAAACAATCTCGCGGACAACTTAAAGAG
GGACACGGGTGCCCACCATGTTCCGCGGTTCGACAAGCACTTGGAAGACT
TTTACGCCTGTTGCGACCAGATCGAGATCCACTTGAAGACGGCGATGCAG
TGCCTCCAGCAGCAGAACTCCTCCAATCACTATCTCCCCGGTCCGGTGAC
TCCCATGCGCATGGAGACCTTTATGCCGGACAACGCCGGCCCCATTTCGT
ATCCCACTTACTTGAACACGGTCCGCGTTCACATACAGTCCGCCAAGGAT
ATACACGACACTCTGATTAGTGCCGCGCAGAACATTTCGCAGGCTGATGC
AAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATA
ATCATAATCATAATCATAATCATATCACACTAGCCTAGGAGATCCTGGTC
ATGACTAGTGCTTGGATCTCCACCAATAAAAAACGCCCGGCGGCACCGAG
CGTTCTGAACAAATCCAGATGGAGTCTGAGGTCATTACTGGATCTATCAC
AGGAGTCAGGGGAGCTCGATATCAATACCGCCCCGCCCTGCCACCATCGC
AGGTATTGTTGATTCATTAAGCAATTCTGCCG
UFO11779.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:26:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ix-RA | 727 | CG13201-RA | 79..642 | 85..648 | 2820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:26:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11359522..11360085 | 648..85 | 2820 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:26:19 has no hits.
UFO11779.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-28 10:03:15 Download gff for
UFO11779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ix-RA | 66..650 | 73..656 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:51:32 Download gff for
UFO11779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ix-RA | 66..650 | 73..656 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:57:56 Download gff for
UFO11779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ix-RA | 66..650 | 73..656 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:57:56 Download gff for
UFO11779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11359514..11360098 | 73..656 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:51:32 Download gff for
UFO11779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7247019..7247603 | 73..656 | 98 | | Minus |
