UFO11780.5prime Sequence
1145 bp (1037 high quality bases) assembled on 2012-06-28
> UFO11780.5prime
CTGAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTC
GTATAGCATACATTATACGAAGTTATCAGTCGACATGTCCGATTTCGAGT
ACGGAATTTGCCCTTACGACAAATCGCACCGCATCTTGCTCTTCCGGATG
CCCAAGCACTTAATTAAGTGCGAGAAGAACTACTGTGGACCGCCGCTGCA
GACCTGCAAGTACAACGCCACACACCGAGTCCAGGACATGGAGAAGCATC
TGAAGGAGTGTGACTACTATCTCCGCAGCATCGAAAACCAGGCGGTGCAG
ATAGCGCTTCGTAGTCGCATACCGCCCAAACAGGAAGATGGACATGATGT
GGACACACCATTTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCC
AGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAG
CCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAA
CGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGG
TCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTA
CGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTC
TGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGC
GGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAAC
GGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGA
AACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCT
TTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATA
TATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCACTCCAGAGCGATGA
AACGTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGGTGACACTATCCC
ATATCACCAGCTCACCGTCTTTCATGCATACGAAATTCCGGATGAGCATT
CATCAGGCGGGCAAGAATGGTGAATAATGGCCGGATTAAACTTGTGGCTT
ATTTTTTCTTTACGGTCTTTAAAGCGTATATCAGCTGACGGCCTG
UFO11780.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:26:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14036-RA | 438 | CG14036-RA | 65..343 | 85..363 | 1395 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:26:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5054674..5054952 | 363..85 | 1395 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:26:23 has no hits.
UFO11780.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-28 10:03:15 Download gff for
UFO11780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14036-RA | 48..337 | 80..370 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:51:34 Download gff for
UFO11780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14036-RA | 60..349 | 80..370 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:57:57 Download gff for
UFO11780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14036-RA | 60..349 | 80..370 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 03:57:57 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 21:51:34 has no hits.
