UFO11784.5prime Sequence
1064 bp (979 high quality bases) assembled on 2012-06-28
> UFO11784.5prime
GGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTATAGCA
TACATTATACGAAGTTATCAGTCGACATGCCCGTCTACGTCGGCCTGCTG
ATTAAGACTACGGCCCAACTGTTGTCGCATCCCATGGAGCTAGTTCGTGT
GAATATGCAGGCGAACGTAATCCACCATAGCCGTTTAAGCATAAACCATA
TGTTCCGGCTGATGGCCCGTCATGGATTACCCGGATTTTATTACGGCATT
GTGGCTGCTTGTCTACGCTGTACTGTTCACACGATGTCAACGTACACGTT
GTTCTACAACTTACAGGATAACAAGTACGTCCTAATGCTGCAGCCGTATA
ACACTAGCATGGTCCTGGGTATAACCGGATTTTGGGGCGGCGTATTGGCA
ACACCGTTCGCCAAGCTGGCGGTCATTCGGCAAGCTGATCTTACGCGCGG
ATCCTACGAGAGGCGCAACTATCGAAATTTCTGGAGAGGACTCAAATGTA
TGTACGCGAAGGGAGGATTTACTTACCTATTTACCGGTTGGAAAATAAAC
TCGATTAGTAGCACAGCCGTGGCCGTGCTGTATACTCCTATTAGTGATAA
GGTCCATACAGTGATATCATGGTTCCACAGACTCGACGAGCCGTGGCTTA
GCGATCTCATAACTATGGCGCTAACAGGCAGTATTATCACAGTCATTATG
ACACCAGTGGATGCGTTGGCTACTCTAACGTTAAACGAATCCTCACACTA
TGGCCGCACTTCCTATCCATATCTGTATCGGAAAATTATCCGAAAACATG
GCTACAGGGCTTCTTTTTTGGATGGAACCGGCACTAATGGCCCTTATCCC
ACATACTGTTTGGCACGTTTGTATATCGCTCTACTAGATCGCTATATACA
GCAGCTTTCTAGACATCGTTTGGCGCGCGGGCCCAGTAGTGTCATATCAT
ATCATATCATATCATATCACACTAGCTAGGAGATCTTGTTCATGACTAGT
GCCTGGAATCTCACATAAAAACGCCGCGCACCGGACGTTCTGACCATCAG
ATGGAGTTCTGGGG
UFO11784.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:26:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16736-RA | 908 | CG16736-RA | 39..866 | 77..898 | 3990 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:26:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9257287..9257678 | 468..77 | 1960 | 100 | Minus |
| 3R | 32079331 | 3R | 9256731..9257166 | 898..469 | 1905 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:26:02 has no hits.
UFO11784.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-28 10:03:12 Download gff for
UFO11784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16736-RA | 39..869 | 77..903 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:51:22 Download gff for
UFO11784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16736-RA | 39..869 | 77..903 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:57:46 Download gff for
UFO11784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16736-RA | 39..869 | 77..903 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:57:46 Download gff for
UFO11784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9256728..9257166 | 469..903 | 98 | <- | Minus |
| 3R | 9257287..9257678 | 77..468 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:51:22 Download gff for
UFO11784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5082450..5082888 | 469..903 | 98 | <- | Minus |
| arm_3R | 5083009..5083400 | 77..468 | 100 | <- | Minus |
