UFO11785.5prime Sequence
517 bp (393 high quality bases) assembled on 2012-06-28
> UFO11785.5prime
GAATAGGGAATTGGCCAATTCGTTAACAGATCTGCGGCCGCATAACTTCG
TATAGCATACATTATACGAAGTTATCAGTCGACATGAAGTTGGACCTTAC
CATGAACGACCGTTTCAATCAGCGGTTTCAGTCGGTTTATGGCGGACTTG
TTCCCCAGATCGCCCGACTGGTGCCCTTCAACGACTCTGAGGTGACCTGC
ATCCTGATGATCTACTACAAGTATAGTCTCCAGAATGGGCCCTCTGCTCG
CCGAATAACATCCAGCCAGTTTGTGAACATTGTGATCGGTTTCCAGCAGC
TATATGACATGGACGTGGTGGATCGCATCGTAACCCTAATCGCAGGGGGC
AGGAAACACGGTGACGCCCATGGGAATTTGTCCACTACCTGACCCTTTCT
AATGTCCCCGCCGACATGGAACGGAAAATGGAATTTTGCTTATATGGGTT
TACGACCAAAAATGGCATGGGTAATAAATAGAAGAAATCCATTTCCTCCT
TCGGTCCAAAAGGTTTT
UFO11785.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:26:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| d-cup-RA | 1095 | CG14387-RA | 100..510 | 84..506 | 1695 | 95.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:26:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12892055..12892402 | 84..436 | 1475 | 97.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:26:41 has no hits.
UFO11785.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-28 10:03:19 Download gff for
UFO11785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| d-cup-RA | 53..461 | 76..495 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:51:45 Download gff for
UFO11785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| d-cup-RA | 92..500 | 76..495 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:58:06 Download gff for
UFO11785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| d-cup-RA | 92..500 | 76..495 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:58:06 Download gff for
UFO11785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12892047..12892411 | 76..446 | 95 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:51:45 Download gff for
UFO11785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8717769..8718133 | 76..446 | 95 | -> | Plus |
