UFO11806.5prime Sequence
1110 bp (993 high quality bases) assembled on 2012-06-29
> UFO11806.5prime
CAGTCGACATGAAACTACTGATTGTTGTTCTTGCCCTGGTGGCCGCAGTT
TTGGCCAGACCTCAATTTGGACCTGGTGGTCAAGGAGGATTTGGTGGTCA
ACAAGGCGGCTTTGGTGGACAGGGAGGATTCGGTGGAGGTCCTGGATTTG
GTGGACAAGGTGGTTTCGGTGGCGGACCCGGAGAATATGGCGGTCAAGGT
GGTTTCGGTGGCGGACCGGGAGGATATGGCGGTCAAGGTGGTTTCGGTGG
CGGACCGGGAGGATTTGGCGGTCAAGGTGGTTTCGGTGGCGGACAAGGCG
GCTTTGGCGAACACCACAGACACCATGGAGGACATCATGGGCGCTTCGCA
AGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAA
TCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGT
CATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCG
AGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTAT
CAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCAC
TCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCC
ATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGT
CGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTG
TCCATATTGGCCACGTTTAATCAAAACTGGTGAAACTCACCCAGGGATTG
GCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAG
GTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCG
GAAATCGTCGTGTATTCACTCAGAGCGATGAAAACGTTCAGTTTGCTCAT
GGAAAACCGTGTAACAAGGGTGAACACTAATCCCATATCACAGCTCACCG
TCTTTCATTGCCATACGAAATCCTGATGACCTTCATCAGGCGGCAGAATG
GTGAAATAAACGCCGAATAACTGTGCCTAATTTCTTTACGCTTAAAAGCC
GTAAATATTC
UFO11806.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8157-RB | 824 | CG8157-RB | 25..363 | 9..347 | 1695 | 100 | Plus |
| CG8157-RA | 427 | CG8157-RA | 25..363 | 9..347 | 1695 | 100 | Plus |
| CG8157-RB | 824 | CG8157-RB | 127..286 | 147..309 | 520 | 88.3 | Plus |
| CG8157-RB | 824 | CG8157-RB | 163..325 | 111..270 | 520 | 88.3 | Plus |
| CG8157-RA | 427 | CG8157-RA | 127..286 | 147..309 | 520 | 88.3 | Plus |
| CG8157-RA | 427 | CG8157-RA | 163..325 | 111..270 | 520 | 88.3 | Plus |
| CG8157-RB | 824 | CG8157-RB | 160..232 | 222..294 | 275 | 91.8 | Plus |
| CG8157-RB | 824 | CG8157-RB | 238..310 | 144..216 | 275 | 91.8 | Plus |
| CG8157-RA | 427 | CG8157-RA | 160..232 | 222..294 | 275 | 91.8 | Plus |
| CG8157-RA | 427 | CG8157-RA | 238..310 | 144..216 | 275 | 91.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15325964..15326291 | 347..20 | 1640 | 100 | Minus |
| 2R | 25286936 | 2R | 15326002..15326164 | 270..111 | 495 | 88.3 | Minus |
| 2R | 25286936 | 2R | 15326041..15326200 | 309..147 | 495 | 88.3 | Minus |
| 2R | 25286936 | 2R | 15326017..15326089 | 216..144 | 275 | 91.8 | Minus |
| 2R | 25286936 | 2R | 15326095..15326167 | 294..222 | 275 | 91.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:27:27 has no hits.
UFO11806.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:33:47 Download gff for
UFO11806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8157-RA | 15..363 | 1..351 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:52:15 Download gff for
UFO11806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8157-RA | 18..366 | 1..351 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:58:29 Download gff for
UFO11806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8157-RA | 18..366 | 1..351 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 03:58:29 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 21:52:15 has no hits.
