UFO11813.5prime Sequence
1118 bp (977 high quality bases) assembled on 2012-06-29
> UFO11813.5prime
CAGTCGACATGCGCACGAAACACCTGATCCTGATACTGATCGGAGTGATA
ATCGCCACGATCGTCTTCATCGCATTTGGTCCAGCCGGAGAGCCGAACGA
TTCATTCAAGAACATCGTTGTCCAGACGCACCAGCAGTTTAAAGAGTTCC
AGCGAGGAGCGCGGGCTTTATCAATGCGCTTGCACAGCGATTACTCGTAT
TCCATATTTACCTGTGTGAGGAGTAAACAGGCGCTATTGATTGCCTATAG
CCATCGGTTCAATGTCGCACCGCCACTCACATGCAGAGCAATGCAATTAA
ACTGTAGCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTA
AGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAG
GAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCC
GGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATT
ACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCC
CGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG
ACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCAT
CAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGG
CGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTC
ACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATACAACCCTTTAG
GGAAATAGGCCAGGGTTTTCACCGTAACACGCCACATCTTGCGAATATAT
GTGTAGAAACTGCCGGAAATCGTCGTGTTATTCACTCCAGAGCGATGAAA
ACGTTTCAGGTTGCTCATGAAAACCGTGTAACAAGGTTGAACACTATCCC
ATATCACCAGCTCACGTCTTTCATTGCCTATACGAAATTTCGATGACATT
CATCAGGCGGCCAAGAATGTTGAATAAAGCGGATAAACTTGTGCCTTATT
TTTTCTTTACGTCTTTAAGCCGTAATATCCAGCCTGACCGTCTTGTTAAG
GTTACTTGGAACACTTGA
UFO11813.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14764-RB | 1293 | CG14764-RB | 836..1136 | 8..308 | 1505 | 100 | Plus |
| CG14764-RC | 2272 | CG14764-RC | 366..510 | 8..152 | 725 | 100 | Plus |
| CG14764-RA | 2742 | CG14764-RA | 836..980 | 8..152 | 725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7951886..7952044 | 308..150 | 795 | 100 | Minus |
| 2R | 25286936 | 2R | 7953902..7954046 | 152..8 | 725 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:27:50 has no hits.
UFO11813.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:33:52 Download gff for
UFO11813.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14764-RB | 819..1130 | 1..312 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:52:31 Download gff for
UFO11813.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14764-RB | 829..1140 | 1..312 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:58:43 Download gff for
UFO11813.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14764-RB | 829..1140 | 1..312 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:58:43 Download gff for
UFO11813.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7953902..7954050 | 1..152 | 97 | | Minus |
| 2R | 7951886..7952041 | 153..308 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:52:31 Download gff for
UFO11813.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3839391..3839546 | 153..308 | 100 | <- | Minus |
| arm_2R | 3841407..3841555 | 1..152 | 97 | | Minus |
