Clone UFO11815 Report

Search the DGRC for UFO11815

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:118
Well:15
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG11563-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO11815.5prime Sequence

509 bp (509 high quality bases) assembled on 2012-06-29

> UFO11815.5prime
CAGTCGACATGAAGATCCGCAAGAATCATGCTCGCAAGCGTTATCGCTAC
AATGTAAACCGCAAGACGATGAATAAAACCCGGAGTTCCACCGGAAAAAT
TAAGGATCCCAGGATGAAAAAGATGTGGATGGAGGACCAGCGTGTGGGCA
CCAACTTCAGTGAAATGGGGTTGGCCAAGGACGTCAACAAGGCCATTGCG
ATTCCCAGCTACAAGAAGGACCGCCTCCTAGCGGCCCGAGTTGTGAATGG
GTTTCTGGAGGAGGAGCTGGACGAGGATGAGCGGCGTGTATTGGGCCTCA
AGAAACCAGTCGTAGAGGAGGGTCCAAAACGTGGACACGTAGTCCAGGAA
CTAGAACAACTGGCTAGCGAGCGAGCCGACCCAGAGTTCAGATTACCCAA
GGGCGTGGTCAAGGAACTGTCCTACTTTCTTAACAAACATAAGTTTAACT
ACAAGGCGATGGTTGCCGATCGGAAAAACTTTGGCCAGTGGACGTGGCGG
CAGTTCCGC

UFO11815.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG11563-RA 831 CG11563-RA 108..608 9..509 2505 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:52
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 31737316..31737600 107..391 1425 100 Plus
3R 32079331 3R 31737656..31737776 389..509 605 100 Plus
3R 32079331 3R 31737142..31737239 9..106 490 100 Plus
Blast to na_te.dros performed 2014-11-28 03:27:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\HeT-A 5691 Dyak\HeT-A YAKHETA 5691bp 4564..4627 53..117 106 64.6 Plus

UFO11815.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:33:53 Download gff for UFO11815.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11563-RA 109..618 1..509 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:52:33 Download gff for UFO11815.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11563-RA 99..608 1..509 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:58:44 Download gff for UFO11815.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11563-RA 99..608 1..509 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:58:44 Download gff for UFO11815.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 31737133..31737239 1..106 96 -> Plus
3R 31737316..31737600 107..391 100 -> Plus
3R 31737659..31737776 392..509 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:52:33 Download gff for UFO11815.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 27562855..27562961 1..106 96 -> Plus
arm_3R 27563038..27563322 107..391 100 -> Plus
arm_3R 27563381..27563498 392..509 100   Plus