UFO11815.5prime Sequence
509 bp (509 high quality bases) assembled on 2012-06-29
> UFO11815.5prime
CAGTCGACATGAAGATCCGCAAGAATCATGCTCGCAAGCGTTATCGCTAC
AATGTAAACCGCAAGACGATGAATAAAACCCGGAGTTCCACCGGAAAAAT
TAAGGATCCCAGGATGAAAAAGATGTGGATGGAGGACCAGCGTGTGGGCA
CCAACTTCAGTGAAATGGGGTTGGCCAAGGACGTCAACAAGGCCATTGCG
ATTCCCAGCTACAAGAAGGACCGCCTCCTAGCGGCCCGAGTTGTGAATGG
GTTTCTGGAGGAGGAGCTGGACGAGGATGAGCGGCGTGTATTGGGCCTCA
AGAAACCAGTCGTAGAGGAGGGTCCAAAACGTGGACACGTAGTCCAGGAA
CTAGAACAACTGGCTAGCGAGCGAGCCGACCCAGAGTTCAGATTACCCAA
GGGCGTGGTCAAGGAACTGTCCTACTTTCTTAACAAACATAAGTTTAACT
ACAAGGCGATGGTTGCCGATCGGAAAAACTTTGGCCAGTGGACGTGGCGG
CAGTTCCGC
UFO11815.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11563-RA | 831 | CG11563-RA | 108..608 | 9..509 | 2505 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31737316..31737600 | 107..391 | 1425 | 100 | Plus |
3R | 32079331 | 3R | 31737656..31737776 | 389..509 | 605 | 100 | Plus |
3R | 32079331 | 3R | 31737142..31737239 | 9..106 | 490 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 03:27:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\HeT-A | 5691 | Dyak\HeT-A YAKHETA 5691bp | 4564..4627 | 53..117 | 106 | 64.6 | Plus |
UFO11815.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:33:53 Download gff for
UFO11815.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11563-RA | 109..618 | 1..509 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:52:33 Download gff for
UFO11815.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11563-RA | 99..608 | 1..509 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:58:44 Download gff for
UFO11815.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11563-RA | 99..608 | 1..509 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:58:44 Download gff for
UFO11815.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31737133..31737239 | 1..106 | 96 | -> | Plus |
3R | 31737316..31737600 | 107..391 | 100 | -> | Plus |
3R | 31737659..31737776 | 392..509 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:52:33 Download gff for
UFO11815.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 27562855..27562961 | 1..106 | 96 | -> | Plus |
arm_3R | 27563038..27563322 | 107..391 | 100 | -> | Plus |
arm_3R | 27563381..27563498 | 392..509 | 100 | | Plus |