UFO11817.5prime Sequence
1114 bp (1005 high quality bases) assembled on 2012-06-29
> UFO11817.5prime
CAGTCGACATGTCCTCGTCTGTGGATCACGTGGTACACCACGTACTGGCC
CCAATGGCAATCAACGTCCTCGATCGCGTGGTGCCAGTAATCCGCCAATT
GGTGATCATCATGCATCAGGCATTTCTGGTTGATCACCATGTGTCGGAGC
CCGTGATCGATGTATCCGGCATGATTCAGCCCGTTCGTAAAATAGTCTTG
ATTGTAAACGATTCAACGCCGGAGCACCATGTCGACCAGGAGCAGGTGGT
CAGTTCGGATGACATTAACTACCTGATAAATGAAATTTCGCGAAGTATCC
GAAACTTGGCCCGTTCGACCTATAATACCATCTCGGCGATGGCTGGAGAG
GCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCA
TAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCT
GGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAA
CCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATC
TATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGC
CACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAA
GCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCT
TGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAG
TTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGG
ATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGAAATAGGC
CAGGTTTTCACCGTAACACGCCACATCTTGCGATATATGTGTAGAACTGC
CGGAAATCGTCGTGTATTCACTCCAGAGCGATGAAACGTTTCAGTTTGCT
CATGAAACGGTGTAACAGGTGAACACTATCCCATATCACAGCTCACGTCT
TTCATTGCATACGAAATTCGATGACATTCATCAGGCGGGCCAGATGTGAT
ATCCGATAAACTTGTGCTAATTTTTCTTACGTTTAAAGGCGTAATTCAGC
TGAACGCCTGATAG
UFO11817.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42635-RA | 1028 | CG42635-RA | 59..401 | 8..350 | 1715 | 100 | Plus |
| CG42634-RA | 1028 | CG42634-RA | 59..401 | 8..350 | 1715 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18007993..18008335 | 8..350 | 1715 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:28:01 has no hits.
UFO11817.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:33:54 Download gff for
UFO11817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42635-RA | 53..405 | 1..356 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:52:37 Download gff for
UFO11817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42635-RA | 53..405 | 1..356 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:58:47 Download gff for
UFO11817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42634-RA | 53..405 | 1..356 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 03:58:47 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 21:52:37 has no hits.
