UFO11821.5prime Sequence
1098 bp (976 high quality bases) assembled on 2012-06-29
> UFO11821.5prime
CAGTCGACATGCTCAGCCTGAGGAATGGAATCTTCGCGGGCAATCTTCTC
GGCAGCGGCTTTTGCCTTCAGCGATTTGCGCCCTGTGCCTGTCGCTCTTC
GCGAAAGCCTCCGGCGGGAAACTCCCCGAAGAACCCATACAAGCAGCTGA
ACAATGACTCGGTGGAGGAGAAACGCCTGTCGGTCCTGATGGAGCTGGGG
TGTCGATGTCCGCAGAAGTCGCACAAGGAGCGTTGGTTCCTCACCAACCA
GCGCATTATTTTGGCCCTGGCCACGACCCTGAATCGTCCGCCGGATTTGG
TGTCAGACTTTTTGCACACACTGACCCTCCAGAACTTTTCAGAGATCCTT
CATCCCGCCGAGACGGAGACCTTAAGCCCCTCTTGTAGAGTTCCCTTTGT
GAACTGCGGTGCCTGTGAGAACTTTATGAGAATTTTCGATACTCATGGGA
ATGTAAGGAGCCGCCTTAGCCAGGACTCACTGCAGCTACTAATGAGCGCC
GTGCAAACTGTTTTGAAGCAATCTCCACCCACTGAGCTCCGTGCATTTGA
TGCAGGCGTTAGCGGCCTACGAGGGACACTTAAAAGGGATTCCATAGCGC
GTAGAGCTGGTATCGATCACGACTCAATCGCTCGTCAAAACGGCAGGAGG
CGATTAAGAAACTCGGAAGCCAGGGCCTCAGAAAACAGAAGTCATCTCAA
CACCGGCCTGAGCAACGCACAGCAGGAGATCCTGGATATGTTTTTGGATC
CAGCCTTGAGTCCGCGGGCTTAGATGTCATGCACACGCCCGAAAAATGGG
TTTTCACGGATTCTTTAGCTTTAGAGCGGACCAGGCGGCTCGCCAAATTG
CTCATTCGCGTTAATGATAGACTTATCTGACGCGCGATACTGAGAAACTA
ATAACTGCCATCAAAGACCTCAAATTGGAACAGCAATGTCAACAAATCCA
AAAAACAGCCGCCACGGCATAGCATCAAGCCATGTAAATTCGATCGTACT
TTGAAAGAGTCAGCTCTGCTCGAAGCCTTGCTCATGAGCACTCGCACGCG
GCTCGAGAAAGAAAGCCAGCGATGGTGGACTGTTCTACCGACCCGAAC
UFO11821.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11629-RA | 1624 | CG11629-RA | 29..1088 | 9..1056 | 4875 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21897290..21898261 | 979..9 | 4640 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:28:13 has no hits.
UFO11821.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:33:56 Download gff for
UFO11821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11629-RA | 24..1099 | 1..1069 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:52:43 Download gff for
UFO11821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11629-RA | 24..1099 | 1..1069 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:58:52 Download gff for
UFO11821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11629-RA | 24..1099 | 1..1069 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:58:52 Download gff for
UFO11821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21897188..21898266 | 1..1069 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:52:43 Download gff for
UFO11821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21897188..21898266 | 1..1069 | 97 | | Minus |
