UFO11823.5prime Sequence
1102 bp (972 high quality bases) assembled on 2012-06-29
> UFO11823.5prime
CAGTCGACATGACGAATCTGCGCAAGGAACTGGAGAAATGCAAGCACCCC
AACAGCCGGAAAACCAAGGCGCTGGGCAAGAAGGCACGTCGCCAAAACAA
CAAGCACAAGGTCCGTTTGGGTCATGCCATCAAAAGCAACATCACTGGCG
AGAAGTTGAGCTGGTTTCTCGGCCAAATCGATGAGGGACGCACTGAACCG
CTGAGGCCGCAGGAGCTGGAGGATCTGATTGAGCTCTATTTTACGCGATT
CGACGAGGAGCTGGAGCAGATTAACCTAAAGCAGTCGATTGGCAAACATC
GGGCCAATCAGCATGCCGCCCGCAAGGATGTGATCACCATGACGCTGGAG
AAGGAGCGCAACGAATTCCGCACTGGCGGTCTGGAGCTGATGAACCTCTG
CGATCCACTCAAGCTGAAAATGCTGCGCGATTGGGACGGCAGTGCGCTCA
GTGTGCAGCACCTGAAACTCGACCTAGTCTCCTATAACATGCTGCAGCGG
CTGAAGGAGCAGTCTAAGAAAAAAGAAACCAGCGAGCAGATGGAAACAGC
AAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATA
ATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGG
TCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACC
GAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTA
TCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCA
CTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAAG
CCATCACAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTG
TCGCCTTGCGTATATATTTGCCCATGGTGAAACGGGGGCGAGAGTTGTCA
TATGGCCACGTTTAAATCAACTGCGTGAACTCCCCAGGATGCCTGAACGA
AAACATATCTCATAATCTTTAGGAATAGCAGTTTCACGTACCGCAATCTT
GCAATATTGTGTAGAACTGCGATCGTCTGATTCATTCGAGCGATGAACGT
TC
UFO11823.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15027-RA | 602 | CG15027-RA | 38..577 | 9..548 | 2700 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15085184..15085721 | 548..11 | 2690 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:27:43 has no hits.
UFO11823.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:33:51 Download gff for
UFO11823.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15027-RA | 9..560 | 1..552 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:52:26 Download gff for
UFO11823.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15027-RA | 29..580 | 1..552 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:58:39 Download gff for
UFO11823.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15027-RA | 29..580 | 1..552 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:58:39 Download gff for
UFO11823.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15085184..15085727 | 1..548 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:52:26 Download gff for
UFO11823.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14979217..14979760 | 1..548 | 99 | | Minus |
