UFO11824.5prime Sequence
1103 bp (1001 high quality bases) assembled on 2012-06-29
> UFO11824.5prime
CAGTCGACATGGACGATAAATTGGAAAAGTACTGGAGACGTCTATTTTAT
ATGAAGTCAGTTGCAGAACCTACGTCGTTGGATGCTGATACGATAGAATA
TTTCGGAATATTCAGTATTGACGAACCAAATGTCGCTGCCCAAAAACGGT
GGTACATTTATTATGGCCTTAGATTAGAAAGGTTAAAGGTTCTGGAAAGG
ATTCGAAAGAAATATGGCAATAGGAATGTCAGAGAAATATTTCAGATCGC
CACATTCAGCGGAGTGGGATTTCATAAAGTCGTCAGAGAATATTTCTCCA
ACTTAAAATGGTTCACAAGCAGAAATCAATTGGAAGCTCCACTAAATAGT
TATTATAATGATGAAAGACTAGTGAAAACTGTTTCGGACTTGCATAACAA
GGAGCAAAAAAGAATCTTTGACTATATAATGATACAACACGCCTGGTTTG
AGCGGTATAATGATCAAAAACCACCTCCTGCTAAACATGCAAGCTTTCTA
GACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCA
TAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAG
TGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTG
AACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAG
TCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAG
TACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAAC
GGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCG
TATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTG
GCCACGTTTAAATCAAACTGGTGAAACTCACCCAGGGATTGGCCTGAGAC
GTGAAACATATCTCATAATCCCTTTAGGGAAGTAGCAGGCTTTCACGTAC
ACGCCACATCTGCGAATAATTGTGTAGAACTAGCGAAATCGTCTGCTATC
ATCAGACGATGAAACGTTTCAGTTTGCTCATGCAAACGGGGGTAACAGGT
GAA
UFO11824.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33469-RB | 600 | CG33469-RB | 75..556 | 7..488 | 2410 | 100 | Plus |
| CG33469-RA | 651 | CG33469-RA | 126..607 | 7..488 | 2410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14605696..14606177 | 488..7 | 2410 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:27:47 has no hits.
UFO11824.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:33:51 Download gff for
UFO11824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33469-RA | 88..585 | 1..500 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:52:29 Download gff for
UFO11824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33469-RA | 121..618 | 1..500 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:58:41 Download gff for
UFO11824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33469-RA | 121..618 | 1..500 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:58:41 Download gff for
UFO11824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14605696..14606181 | 1..488 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:52:29 Download gff for
UFO11824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10493201..10493686 | 1..488 | 99 | | Minus |
