UFO11830.5prime Sequence
1111 bp (986 high quality bases) assembled on 2012-06-29
> UFO11830.5prime
CAGTCGACATGGCCAGAAAAATCATGTCAGTGAAACAGTCGAGCCGCTCT
CCATGTTGTTGGTTCGGTTTGCTCCTGGTCGCCATTTTCCTGCAGCCATC
CGCGAGCCAATACTACGGTTATCCCTATTACGGCGGCGCTAATGCGGGAG
CGGGATCGGGATACGGGAACATATACGGCAGCGGCATGTACGGATACCCC
TACAGCTACGGCGGATATCCGTACTACTCGTATCCCGGCTACAACCCGTA
CTCGATGTACGGTGGATACGGGCAGTACGGATACCCCTATGGAGGATATC
CCTACGGCGGCAATGGCATGAACGTGGCCTACGCCAGCAGCAGTGGAGGA
TTCGCAACAGCCAGTGCGGGTGGAAGCGGATACTACGGCGCAAGCTTTCT
AGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATC
ATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTA
GTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCT
GAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGA
GTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCA
GTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAA
CGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGC
GTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATT
GGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGA
CGAAAAACATATTCTCAATAACCCTTTAGGGAAATAGGCCAGGTTTCACC
GTAACACGCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTC
GTGTATTCACTCAGGAGCGATGACACGTTTCAGTTTGCTCCATGGAAAAC
GGTGTAACAGGGTGACCACTATCCAAATCACCAGCTCCCCGTCCTTCATG
CCATACGAATTCGGAGTGAACATTCATCAGGCGGGCAAGAATGGTGAATT
AGGGCCGAATA
UFO11830.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14563-RA | 499 | CG14563-RA | 15..397 | 7..389 | 1915 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21842058..21842372 | 321..7 | 1575 | 100 | Minus |
| 3L | 28110227 | 3L | 21841910..21841977 | 389..322 | 340 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:28:41 has no hits.
UFO11830.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:02 Download gff for
UFO11830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14563-RA | 7..405 | 1..395 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:00 Download gff for
UFO11830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14563-RA | 7..405 | 1..395 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:59:06 Download gff for
UFO11830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14563-RA | 7..405 | 1..395 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:59:06 Download gff for
UFO11830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21841910..21841977 | 322..389 | 100 | <- | Minus |
| 3L | 21842058..21842376 | 1..321 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:00 Download gff for
UFO11830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21835010..21835077 | 322..389 | 100 | <- | Minus |
| arm_3L | 21835158..21835476 | 1..321 | 98 | | Minus |
