UFO11832.5prime Sequence
1097 bp (972 high quality bases) assembled on 2012-06-29
> UFO11832.5prime
CAGTCGACATGCACATCACGGTTGTTTGCCTCGTATTCACCTGGGGCCTG
AGCCACAGTCACGCAGCCACGACAATCCTGCATGGCAACGGACAGGTGGC
CAGTGCCATTTCCCACCAGAGCTTCAGCAGATTATCCTCAGCAGAGCCAC
TAACCCTGCAGTCCCGAAAGCAAACACATCAGCTGCTCGTTCCCTCTGCC
AGGATTGTTAATCATCACCAGGCGGCAGTGGAACGACAGCAGGTGGAGAG
GTTCTTTCAGGCGGCAACGGCGGAGGCGGAGGAGGTGCCTGTCATCTCTG
GACAGACACCCGCCCATCTCACCTACGCTGCCCATCCAGTGGTGCACCAG
ATGCTGCCAAGGATTAAGCCAGTGCGAAACATTAGCTACGCCTCCCTGAT
CCCAGGACCTCGCAGCCTGAACACTCATACGAATCGGAATTTGTCACCCG
TTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGT
CATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATC
CTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGC
AACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGA
TCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCT
GCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGG
AAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCAC
CTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGA
GTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGG
GATTGGCTGAGACGAAAACATATTCTCAATAAACCCTTTAAGGAATAGCC
AGTTTTCACCGTACACGCCACATCTGCGATATATGTGTAGAACTGCCGAA
ATCGTCTGTATCACTTCAGAGCGATGAAACGTTCAGCTGCTCATGGAAAC
GGTTACAAGTGAACCTATCCCAATCACCAGCTCACGCTCATGCCATA
UFO11832.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13058-RA | 606 | CG13058-RA | 27..471 | 8..452 | 2225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16328967..16329399 | 20..452 | 2165 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:28:49 has no hits.
UFO11832.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:03 Download gff for
UFO11832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13058-RA | 26..473 | 1..452 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:05 Download gff for
UFO11832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13058-RA | 24..471 | 1..452 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:59:10 Download gff for
UFO11832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13058-RA | 24..471 | 1..452 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:59:10 Download gff for
UFO11832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16328968..16329399 | 21..452 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:05 Download gff for
UFO11832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16322068..16322499 | 21..452 | 100 | == | Plus |
