UFO11844.5prime Sequence
1065 bp (932 high quality bases) assembled on 2012-06-29
> UFO11844.5prime
CAGTCGACATGCGCCTGAAAACAGTTTTAACCATCTTTTTCGCCATATCG
CTGACTCTGGTTGCTGGTCAAGATCGGGACTGTGATGAATTGGCAAGGAG
ATGTGAATCCTGTGTGAGGCGTCTAAATAATACAATCGATCGCGATTTAC
CCCTCTTCAATAGAGAGTGCAGACAAAGGACCGAATTATCTTGGCGCTGG
AGGAACGTCGGACGCTGTGAGCTCTCCAAGCTAAATTGCTTGGGTTGGCA
ATCACCCATGAACTGTGAAGACATTGCTATGAGGGCTGGTATGGAACGCA
GGCGTACTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTA
AGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAG
GAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCC
GGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATT
ACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCC
CGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG
ACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCAT
CAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGG
CGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTC
ACCCAGGGATTGGCTGAGACGAAAACATATTCTCATAAACCCTTTAGGGA
AATAGGCCAGGTTTCCCCGTAACACGCCACATCTTGCGAATATATGTGTA
GAAAACTGCCGGAAATCGTCGTGGTATTCACTCAGAGCGATGAAAACGTT
CAGGTTGCTCATGGAAACGTTGTAACAGGGTGAACCACTATCCCATATCA
CCAGCCTCACGTTCTTTCATTGCATAACGAAATTCGATGACAATCATCAG
CCGGCAAGATGTGAATATGCGATAACTTGTGCTTATTCCTACGTCCTAAA
GCGTATATCAGCGAA
UFO11844.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:29:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eig71Ea-RA | 412 | CG16931-RA | 50..349 | 9..308 | 1500 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:29:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15649315..15649518 | 245..42 | 1020 | 100 | Minus |
| 3L | 28110227 | 3L | 15649189..15649254 | 308..243 | 330 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:29:32 has no hits.
UFO11844.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:11 Download gff for
UFO11844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eig71Ea-RA | 45..357 | 1..316 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:29 Download gff for
UFO11844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eig71Ea-RA | 45..357 | 1..316 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:59:32 Download gff for
UFO11844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eig71Ea-RA | 45..357 | 1..316 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:59:32 Download gff for
UFO11844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15649189..15649253 | 244..308 | 100 | <- | Minus |
| 3L | 15649317..15649517 | 43..243 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:29 Download gff for
UFO11844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15642289..15642353 | 244..308 | 100 | <- | Minus |
| arm_3L | 15642417..15642617 | 43..243 | 100 | <- | Minus |
