UFO11847.5prime Sequence
1090 bp (972 high quality bases) assembled on 2012-06-29
> UFO11847.5prime
CAGTCGACATGAAACCGGGACTCGAAACCACCGACGAGGTCGAGGAGAAT
GGCGACGCACTGGATCATCGCGAGGGGGATCCCCGACCGCTGCCCTACGA
CTTCGAAAAGGAGCTGATCCATAGATCTAACCGGCACATCCGACTTTACG
AAACCTTTGTTCCAGTGAGCCAAGTTCATCCGCTAACACGGAAGTTCTAC
GCCCAGTATGAGCAACGCCAGCCGACGGATACCTTGAGGTACCTACGGCA
CACTTGGCCTGAGAAGCATGTGGAGCGTCAGAGGCAGCTCGGAAAAGCTG
TTCCGCTCCTGGAGTCGCAGGTGTACGGCTGGTTGCCGCTCAAAAGTGGA
GAGCGAGCCGCCGATCTGAACTTTCTGCATGCCAAGAAGGTGCGCTGCGG
CATGACTGTTCACGGGGAGCGCTTGGTGGCGGAGAGGATTACGGCGCGTC
CTCCGTTTAACGGACTCAGATTCCTGCTTCACGCAAGCTTTCTAGACCAT
TCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCA
TAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTG
GATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAA
TCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAG
CGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGT
TGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATG
ATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATATA
TTTGCCCATGGTGAAAACGGGGGCGAAGAGTTGTCCATATTGGCCACGTT
TAAATCAAACTGGTGAAACTCCACCCAGGGATTGGCTGAAACGAAAAACA
TATCTCATAAACCCTTTAGGGAATAGCCACTGTCACGTACACGCCCACAT
CTGGCGAATATTTTGTGTAGAACTGCGAATCGTCTGCTATCACTCCGGGG
CGGATGAAACGTTCAGTGCTCATGGAACCGGGTTACAGGG
UFO11847.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:29:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32801-RA | 937 | CG32801-RA | 390..864 | 8..482 | 2375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1902155..1902464 | 482..173 | 1550 | 100 | Minus |
| X | 23542271 | X | 1902622..1902788 | 174..8 | 835 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:28:59 has no hits.
UFO11847.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:05 Download gff for
UFO11847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32801-RA | 1..477 | 9..486 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:10 Download gff for
UFO11847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32801-RA | 384..867 | 1..486 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:59:15 Download gff for
UFO11847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32801-RA | 384..867 | 1..486 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:59:15 Download gff for
UFO11847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1902155..1902462 | 175..482 | 100 | <- | Minus |
| X | 1902622..1902794 | 1..174 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:10 Download gff for
UFO11847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1796188..1796495 | 175..482 | 100 | <- | Minus |
| arm_X | 1796655..1796827 | 1..174 | 98 | | Minus |
