UFO11859.5prime Sequence
1075 bp (976 high quality bases) assembled on 2012-06-29
> UFO11859.5prime
CAGTCGACATGTGGAGATTCCTTCTGATTTGTAGTATTCAGCTGATTTGC
GCATCAGAGCATAGTGGCGAAGGATATGGCGATGGTTACGGATACGGCGG
AAGCGGAGGCGGCGGCAGTGGATCACTAGGCAGCGGCGGAGGAGGCGATG
GCCACTTTCACCACCACACACCCACCACGTACTCGGAGATCTCGAAGCAT
GTGCCGGTGCATGTGATCGAAAAGGTGCCACTGCCCATTCCCCATCCGGT
CGCCGTTCAGGTGCCCAACGTAATTCGGCTTCAAATTCCGGAACCCTATG
CCGTCCACGTGCCCGTCCAGCAGGAGATCCATGTGCCGGTGTATAAAATA
GTGCCCGAAATAACCGAAAAGAAGATACCCTACACCGTCGAGAAGCCATA
CCCCGTCGAGGTGGAGAAACCTTATCCCGTCGAGGTGATTAAGCAGATCA
AGATCCCGGTGCCTAAGCCCTATCCTGTTCCGTTTACCATCTACAAACAC
GTCCTGCAAAAGGAGCACGGCTGGGCAAGCTTTCTAGACCATTCGTTTGG
CGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATA
ATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCA
CCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATG
GAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCG
ATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTC
ATTAAGCATTCTGCCGACATGGAAGCCATCACAACGGCATGATGAACCTG
AATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTGCCCAT
GTGAAACGGGGCGAGAGTTGTCATATTGGCCACGTTTAAATCAAACTGTG
AACTCACCCAGGATGCTGAAACGAAAACATATCTCCGTAACCCTTTAGAT
AGCAAGCTTTTCACGTACACGCCCAATCTGCAATATATGTGTAGAACTGC
GGATCGTCTGAATTCCACTCCGAGC
UFO11859.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:29:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33299-RC | 762 | CG33299-RC | 46..561 | 9..524 | 2580 | 100 | Plus |
| CG33299-RB | 825 | CG33299-RB | 121..624 | 21..524 | 2520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:29:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9656720..9657223 | 21..524 | 2520 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:29:35 has no hits.
UFO11859.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:12 Download gff for
UFO11859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33299-RC | 38..561 | 1..524 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:31 Download gff for
UFO11859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33299-RC | 38..561 | 1..524 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:59:33 Download gff for
UFO11859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33299-RC | 38..561 | 1..524 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:59:33 Download gff for
UFO11859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9656720..9657223 | 21..524 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:31 Download gff for
UFO11859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9656720..9657223 | 21..524 | 100 | == | Plus |
