UFO11861.5prime Sequence
1100 bp (1002 high quality bases) assembled on 2012-06-29
> UFO11861.5prime
CAGTCGACATGTTCGCTCTCGTATCGCTTTTCATCCTGGGTGTTGGTGCC
GCCGCCGCCATCGAGCTGCCCATCTACCACTCACCCGCGGCCATTGTGAA
GCCACTGCTGAAGACCGTAGAGGTGGAGGCACCTGCCCACTACGATTTCG
CCTACTCGGTGCACGACGAGCACACCGGCGACATCAAGAGCCAGACGGAG
TCGCGGAAGGGCGATCAGGTCCAGGGTCAGTACACGCTGGTCGATGCCGA
TGGCTATCTGCGCACCGTGGACTACACTTCGGATGCCCACAACGGCTTCA
ATGCGGTGGTGCGTCGCGATCCCCTGGGCCAGAAGGTGATCAAGGCTGCG
CCCATTGCCAAGCTCCTGGCTCCCGCACCACTGCCACTGGCCTATGCGGC
ACCCAAGCTCCTCGCGCCCGCTAAACTGCCCCTCGGCCTTTACCATGCAA
GCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAAT
CATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTC
ATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGA
GCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATC
AACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACT
CATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCA
TCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTC
GCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGT
CCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTG
GCTGAGACGAAAACATATCTCATAACCCTTTAGGGAATAGCCAGGTTTTC
ACCGTAACACCGCCACATCTGCGAATATATGTGTAGAAACTGCGGAAATC
GTCGCAGTATCACTCCAGAGCGATGAAACGTTCAGTTGCTCATGTAACCG
GTGTAACAAGGTGAAACTATCCATATCACACGCCTCACGGCTCATGCCTA
UFO11861.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:30:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr30F-RA | 827 | CG31876-RA | 72..509 | 9..446 | 2190 | 100 | Plus |
| Cpr30B-RA | 711 | CG3818-RA | 196..324 | 171..299 | 240 | 79.1 | Plus |
| Cpr64Ab-RA | 552 | CG15007-RA | 225..363 | 174..312 | 230 | 79.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9932590..9933018 | 446..18 | 2145 | 100 | Minus |
| 2L | 23513712 | 2L | 9543143..9543271 | 171..299 | 240 | 79.1 | Plus |
| 3L | 28110227 | 3L | 4211069..4211207 | 312..174 | 230 | 77.7 | Minus |
| 3R | 32079331 | 3R | 6687190..6687298 | 219..327 | 215 | 79.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:30:05 has no hits.
UFO11861.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:18 Download gff for
UFO11861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr30F-RA | 1..441 | 9..447 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:51 Download gff for
UFO11861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr30F-RA | 60..503 | 9..454 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:59:50 Download gff for
UFO11861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr30F-RA | 72..515 | 9..454 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 03:59:50 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 21:53:51 has no hits.
