UFO11863.5prime Sequence
1090 bp (975 high quality bases) assembled on 2012-06-29
> UFO11863.5prime
CAGTCGACATGGATTTCCACCTGCTGATGATTGCACTCGTGCTTGCACCA
GTCTTTACACCTGTCCACTGCCAGGTGGCCTGCAATGCGAGGAGCGGCCC
TGTCCGCCAGAAACGCATCGTTCTCAGCAGCCCGGGAACAGGTGGGCTGG
CCGAGTTGGACACTTGCCAGTACCGCGTGGCGCCGTGGAGCGGCCAGGTG
TGTCAGGTGCGCGTTGATTTCGAGCGTTTGGAGCTGCCGCAGCCGCAGTT
GAATGCCAATTCCGGAGTGCTGGAGTGCGTCGATTTTCTGCAGATACAGC
ATTTCCGGCTGTGCGGTCGCAACAGTGGTCAGCACTTGTATATACCCATT
CGCCGGGGTCAGGAGCTGCAGCTTCTGTTTCGACTGGCCACGTCCCTCGG
CAGGCAGTCCACCTGGCAGCTGACTCTCACCCAACTAGAGTGTCCCAGGG
ACTCCGCCAGGGGTGTAGGTACAAGGCAACCCGAGGTGCAAACACCCACT
GTGCGACCGATTTTGCCCTTTTTGGGTAACTTCCTGCCGCGGACCATCTT
TGGCGGACAATCTGGAATCGGCTCGGGTTCCGGTCCCGCTGCCCAGCTTA
TCCAGACTTTCACATCGCCTTCAAGTGCGGATCTGGAGATGTTGGCACCT
CTGGGCTGTGATCAGTACTACAGGACCACCACTGGCGGAATAGTGAGCTT
CAATTTTGCAGGTGGCGTCTATATGCCCAACATGAAGTACTCGATTTGTG
TCAAGGGAGCGGCAGACAACGAGATAAGCTACAAGATCACGCACTTTGAG
CTCTCGAAGGCGAACTCCGAGCAGCCAGGACCTGCCTATGACACCGATTG
CCGCAGTACAGTGCTGACTCCGTTGCGCGTATCTGACTATGTGAGCATTC
CCGATGCATACATGGTCGGCAGGCCAGAGCTGCAGGCCCCTCACTACTGT
GCAATGGATTGGCTGACAGGAGCTAGTGCCCGGCCGCCTTTTTGTCCTGC
GATTCGCCGTGATTCGCAGTTCAGTGGATCTGAAACGGCTTCCAGCTGAC
CTCCGTCCGGCCGTACAAGAATTCCCTGAAGTCCAGATCT
UFO11863.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:30:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15153-RA | 1317 | CG15153-RA | 15..1102 | 5..1085 | 5060 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18091469..18092242 | 778..5 | 3855 | 99.9 | Minus |
| 2L | 23513712 | 2L | 18090988..18091267 | 1052..777 | 1065 | 95.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:30:11 has no hits.
UFO11863.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:19 Download gff for
UFO11863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15153-RA | 1..1065 | 9..1067 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:56 Download gff for
UFO11863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15153-RA | 11..1083 | 1..1067 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:59:53 Download gff for
UFO11863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15153-RA | 11..1083 | 1..1067 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:59:53 Download gff for
UFO11863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18090969..18091265 | 779..1067 | 95 | <- | Minus |
| 2L | 18091469..18092243 | 1..778 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:56 Download gff for
UFO11863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18090969..18091265 | 779..1067 | 95 | <- | Minus |
| arm_2L | 18091469..18092243 | 1..778 | 99 | | Minus |
