UFO11865.5prime Sequence
1087 bp (971 high quality bases) assembled on 2012-06-29
> UFO11865.5prime
CAGTCGACATGACCGATACCAGTGCAAATAATTTGGATGTATCGGTGGAT
GTGGTCTGGCCGACGATAATTGTCCTGGCCATGCTGGTCATAAATGGCTT
CGTTTTCGCCTACATTATGCGCAAGCGGCGGGAATACAAATGCCAGGAGG
AGGAGCTGCAGCAACAACAACAACCTGTTCCACATTCCTCCTATGCGGCC
ACTTCGACAACGGAACGGCATGCGGATGCGGATCAGGAGGACGATAGCTG
TGCCATCGAGATGGAGCGACTGGCAAGCTTTCTAGACCATTCGTTTGGCG
CGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAAT
CACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACC
AATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGA
GTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGAT
ATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCAT
TAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGA
ATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCAT
GGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAA
AACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCA
ATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATC
TTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCACTCCA
GAGCGATGAAAACGTTTCAGTTTGCTCATGGAAACGGTGTACAAGGTGAC
ACTATCCCATATCACCAGCTCACCGTCTTTCATTGCCATACGAAATCGGA
TGAGCATTCATCAGCGGCAAGATGTGAATAGCCGATAAACTGTGCTATTT
TTCTACGTCTTAAAAGCGTAATCAGCTGACCGGTCTGTTATAGGTAACTG
AGCACTGACTGAATGCCTCAAGTTTCTTACGATGCCA
UFO11865.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:30:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42806-RB | 803 | CG42806-RB | 267..530 | 9..272 | 1320 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13964919..13965182 | 9..272 | 1320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:30:18 has no hits.
UFO11865.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:21 Download gff for
UFO11865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42806-RB | 245..515 | 1..272 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:54:00 Download gff for
UFO11865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42806-RB | 260..530 | 1..272 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:59:56 Download gff for
UFO11865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42806-RB | 260..530 | 1..272 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:59:56 Download gff for
UFO11865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13964912..13965182 | 1..272 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:54:00 Download gff for
UFO11865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9852417..9852687 | 1..272 | 98 | == | Plus |
