UFO11868.5prime Sequence
1129 bp (1018 high quality bases) assembled on 2012-06-29
> UFO11868.5prime
CAGTCGACATGAAGCTACTTCTTCCTTTGACTTTGGCAGTGATTGCCATT
TGCTGCATGTCCTTTATTGAGTGCGCCTCGTCGGGCGACACAGCAACCAA
AACTGGGACAGGCACTGGAACTGGAACTGGTACCGGCACCGGCACCGGCA
CCGGAACAGCCACCACATCGACAACTGTTGCTCCAACAACCACCTCTACC
ACGACCGCAGAAGCGACCGTGCACCACAGAAGGATACATCGGCGCAGGCG
TCGCAACCTAAGGAGACTCCGACACAGGCGCGCAGAGGCCGAGCGAAGAC
GCCGATTGGGCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAG
GTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCC
TAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACG
CCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTC
ATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACG
CCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTG
CCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGG
CATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGG
GGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAA
CTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTT
AGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATA
TGTGTAGAAACTGCCGGAAATCGTCGTGTATTCACTCCAGAGCGATGAAA
CGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGTGACACTATCCATA
TCACCAGCTCACCGTCTTTCATTGCATACGAAATTCCGGATGAGCATTCA
TCAGGCGGGCAGAATGTGAATAGACGATCAAACTTGTGCTATTTTTTCTT
TACGTCTTAAAAAGCGTAATATCAGCTGACCGGTCTGGTTAAGGTACTGA
CACTGACTGAATGCCTCAAGGTTCTTTAC
UFO11868.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:30:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42815-RA | 408 | CG32186-RA | 26..328 | 9..311 | 1515 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17791159..17791461 | 311..9 | 1515 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:30:27 has no hits.
UFO11868.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:23 Download gff for
UFO11868.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42815-RA | 1..306 | 9..312 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:54:08 Download gff for
UFO11868.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42815-RA | 18..328 | 1..311 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:00:02 Download gff for
UFO11868.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42815-RA | 18..328 | 1..311 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 04:00:02 Download gff for
UFO11868.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17791159..17791469 | 1..311 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:54:08 Download gff for
UFO11868.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17784259..17784569 | 1..311 | 98 | | Minus |
