UFO11869.5prime Sequence
1097 bp (1001 high quality bases) assembled on 2012-06-29
> UFO11869.5prime
CAGTCGACATGTGTTCCAAACTAACTCTTTTCCTGGGGTTAGTGGCCCTC
ATTGCTGCTGTCTTTGCTCTTGATGATCCCACATCGCCGACATCCCCAAC
ATCTCCAACATCTCCAACTTCGCCGACTTCTCCAACTTCGCCGACTTCTC
CAACTTCTCCCACTTCTCCTACATCACCAACTTCACCAACAACGCCAGAT
GCCTCTACTGCCACCACTGCCGCCCCCTCTACGGCATCCACTACCACAGA
AAGGACTCGCAGACGCAGGCGCAGGCGCAGGATAATCCGGATCCGCAGGT
TCAGGGGCGGCAACCGCCGTCGTGGATTCGGTAGACGCAGATTCGGTGGT
CGCCGGTTCGGTGAGGGAGGTGTCCGTGAAGTCGTGATCCGTGAGCGCGG
ATTGGAGCGCCTCCTTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGG
CCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAAC
TAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAA
AAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTG
AGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAA
TTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCA
TTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCC
AGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAA
AACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAACTGGT
GAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAACCC
TTTAGGAATAGGCCAGTTTCACCGTAACACGCACATCTTGCGATATATGT
GTAGAACTGCCGGAAATCGTCGTGTATTCACTCCAGAGCGATGAAAACGT
TCAGTTTGCTCATGGAAACGGTGTACAGGGTGACACTATCCCATATCACA
GCTCACGTCTTTCATGGCTCGACTCGGATGACCATTCCTCAGGCGGC
UFO11869.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:30:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32198-RB | 470 | CG32198-RB | 15..422 | 9..416 | 2040 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18526990..18527397 | 9..416 | 2040 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:30:30 has no hits.
UFO11869.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:23 Download gff for
UFO11869.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32198-RB | 1..411 | 9..420 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:54:10 Download gff for
UFO11869.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32198-RB | 6..431 | 1..428 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:00:04 Download gff for
UFO11869.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32198-RB | 6..431 | 1..428 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 04:00:04 Download gff for
UFO11869.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18526981..18527397 | 1..416 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:54:10 Download gff for
UFO11869.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18520081..18520497 | 1..416 | 99 | == | Plus |
