UFO11872.5prime Sequence
1135 bp (1018 high quality bases) assembled on 2012-06-29
> UFO11872.5prime
CAGTCGACATGTCGACTACTCCAGAGGATCGGCTGCGTGAGAACATCAAT
CGATGCCTCTCGGATTCCCTGGTGAAGGGAGTTGGTGGTCTGGTGATCGG
ATCCGTGGTCACCCTGCTCTTCTTCCGTAGGCGCATATGGCCCGTCTGGC
TGGGCACTGGATTCGGCGTGGGCGTGGCATATCGTGGCTGTGAAAAGGAG
CTCAACGATGTAAAGTTTGGCCAACGAAAGGCAAGCTTTCTAGACCATTC
GTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATA
ATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGA
TTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATC
CAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCG
AGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTG
TAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGAT
GAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATAT
TTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTT
TAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACA
TATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACAC
GCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTA
TTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGTGTA
ACAAGGGTGAACACTATCCCATATCACCAGCTCACCGTCTTTCATTGCCA
TACGAAATTCCGGATGAGCATTCATCAGGCGGGCAAGATTGTTGAATAAA
GGCCGGAATGACTTGTGCTTATTTTTTCTTTACGGTCTTTAAAAAGCCCG
TATAATCCAGCTGAACCGGTCTGCTTAAAAGTACATTGAGCACTGACTGA
AATGACTTCAAATGTTTCTTTACGATGCCATTGGAAAATAATCACGGTGC
ATAATCAATGGATTTTTTCTCCATTTAGCTTCCTT
UFO11872.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:30:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12479-RA | 428 | CG12479-RA | 93..314 | 9..230 | 1110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14151693..14151914 | 230..9 | 1110 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:30:02 has no hits.
UFO11872.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:17 Download gff for
UFO11872.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12479-RA | 93..321 | 9..238 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:49 Download gff for
UFO11872.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12479-RA | 93..321 | 9..238 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:59:48 Download gff for
UFO11872.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12479-RA | 93..321 | 9..238 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:59:48 Download gff for
UFO11872.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14151693..14151914 | 9..230 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:49 Download gff for
UFO11872.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14045726..14045947 | 9..230 | 100 | | Minus |
