UFO11879.5prime Sequence
1108 bp (1005 high quality bases) assembled on 2012-06-29
> UFO11879.5prime
CAGTCGACATGTCGAAAATTTATCTGAAGGCCATGGAGGATGTGGTGCAG
CGAAACACGGACAACACAAACCGGATTACGGAGCAGGCGCAGGGATTCGT
GGTGTCGGAAAATGCCGGGGACAGTCTGCTGCACACTTCATTCGATTTGA
CCACGGCCCAGTCGATTGTGAAGCACCTGCACGCCAGTTTCCTGAAATTG
GCCCAGAGCTGCGTCCGTGATCTGGATACCGATGATAAGCTGTGCTTTCT
GCGCGTGAAAACCCGCAAGCACGAATTCCTGGTTAGTCCAGAGGAAGCCT
TCACTGTGACCGTGGTATTGGCAAGCTTTCTAGACCATTCGTTTGGCGCG
CGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCA
CAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAA
TAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGT
TCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATAT
CAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTA
AGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAAT
CGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGG
TGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAA
CTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAAT
AAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTT
GCGAATATATGTGTAGAAACTGCCCGGAAATCGTCGTGGTATTCACTCCA
GAGCGATGAAAACGTTTCAGTTTGCTCATGAAACGGTGTAACAGGTGACA
CTATCCCATATCACAGCTCACGTCTTTCATGCATACGAAATCCGATGACA
TTCATCAAGGCGGCAGGATGTGATAAGCGGATAACTGTGCTTATTTCTAC
GTCTTGAAGCCGTAATATCAGCTGACGTCTGGTTATGGTACTGACACTGA
CTGAATGC
UFO11879.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| robl62A-RB | 591 | CG1014-RB | 103..414 | 9..320 | 1560 | 100 | Plus |
| robl62A-RA | 751 | CG1014-RA | 103..414 | 9..320 | 1560 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1477721..1478032 | 9..320 | 1560 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:30:59 has no hits.
UFO11879.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:29 Download gff for
UFO11879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| robl62A-RA | 98..417 | 4..324 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:54:30 Download gff for
UFO11879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| robl62A-RA | 98..417 | 4..324 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:00:19 Download gff for
UFO11879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| robl62A-RA | 98..417 | 4..324 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 04:00:19 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 21:54:30 has no hits.
