UFO11881.5prime Sequence
1090 bp (988 high quality bases) assembled on 2012-06-29
> UFO11881.5prime
CAGTCGACATGTGGCCCATTTGGCTGCTGGTGCTCTTAACGCTATCACTG
GCCACTGGCCGCCAGGTGGGCAGATGCAGTTTGGCCCGGCAGCTGTATCG
ATACGGAATGGCTTACAACGAGCTACCCGATTGGCTGTGCCTCGTGGAGG
GCGAGAGCTCGTTCAACACAAAAGCCATCAATCCCTCGAACGTTGATGGA
TCCGTGGACTGGGGTCTCTTCCAGATCAACGATCGTTACTGGTGCAAGCC
GGCGGATGGTCGTCCATCCAACGATCTGTGTCGCTTGCCCTGCCGCCTGC
TGTTGAGCGACGATATCCGGTATTCCATTGCCTGTGCGAAGTACATCAGG
AAACAGCAAGGATTCTCCGCCTGGGTGGCTTGGAACAATCGATGTCAGGG
TGTCAAGCCCAATGTGAATCACTGCTTCCGGCGGCGACACAGAAATTCGG
GTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGT
CATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATC
CTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGC
AACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGA
TCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCT
GCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGG
AAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCA
CCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGCGAAGA
AGTTGTCCATATTGGCCACGTTTAAATCAAACTGGTGAAACTCACCCAGG
GATTGGCTGAGACGAAAACATATTCTCAATAAACCCTTTAGGAAATAGCC
AGTTTCACCGTACACGCCCACATCTGCGATATATGTGTAGAACTGCGGAA
ATCGTCGTGTATTCCCTCAGAGCGATGAAACGTTCAGTTGCTCATGAACG
TTACAGTGAACTATTCCATCACAGCTCACGGCTTCATGGC
UFO11881.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7798-RA | 516 | CG7798-RA | 1..444 | 9..452 | 2220 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:31:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16222184..16222627 | 452..9 | 2220 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:31:06 has no hits.
UFO11881.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:30 Download gff for
UFO11881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7798-RA | 1..447 | 9..455 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:54:35 Download gff for
UFO11881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7798-RA | 1..449 | 9..458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:00:24 Download gff for
UFO11881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7798-RA | 1..449 | 9..458 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 04:00:24 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 21:54:35 has no hits.
