UFO11891.5prime Sequence
940 bp (884 high quality bases) assembled on 2012-06-29
> UFO11891.5prime
CAGTCGACATGCGATTTAAGACGAGTATAACCATTGGCCACGGAGAGCCA
CCCAGGAATCGGCGGCTAATGGAGCTGGACGACGACTGTCTGCTAATGAT
TTGCGAACATCTAGCGCTGGGAGACCAACTGAGACTGATGGAGGTGCAGG
AGGAACGATTTTCGAGCTTGATACTGCAATTGTGGTCCAACAGATACGCC
AAGCTATTTGATTTTCGCCGGGAGCAGCAATTAAACCTGCTAAAGCCCGA
CGAGCTGGCTCAAATATTGGATCACTTAGGCTGGCGAACAAGAGCGTTAA
TTAACCTGCCAGGTACAGGCGAAGGATGCCGGAAGTGGCTCAAGCGGATG
CGACAAAGCCTCAACCATTTGCAGATACTCAGTTTCACGAAAAGCAATAC
ATTGGTAATACAGAAACTCCCCTACCTGTGCCCCAATGTGGTGGACCTTA
AGCTTGGCGAGTGCGAGGGTTTAACACCCCTTGATGTGGATTTCATGTTT
GAAAACCTTAAAAACCTAAGAGAATTTGAAATGCGCTCTAGTTGGAACTG
CAGCCAACAGAGGTACCAGTATCCCAGAAATCTGGAGATCCTGAAACTAC
CAGCTTGTATGATTACCGCCTGTGTTTCTCAGATCTTTCATTTGCCCCGA
CTCCGTCTATTGACAGCTTTTCTGTGTCGAAATTCCGAGCACGGCCACCT
GGACAATGATGGCAAGGCGAATTGCAGTGGCACAGGAACTTTGTCCGCGT
GCCTGCAGCAAATTCGAGGTCGCAATTGTCGGATTGTGGGTCTCCGTTTG
CATTGTCGACTGGAATGACTGCCTGCCATCGTCGACGTGAAGGAAGTATT
CCCGGCTGCATCCCTTTGCTTGCACTCGCAGCTGACGGTGCCACTATTGA
TGTGGCGGACGGGAACCGTCAGTTGTATAGCCACAGCAGA
UFO11891.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:47:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32182-RA | 1442 | CG32182-RA | 54..978 | 9..937 | 4320 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:47:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17758165..17759068 | 9..914 | 4165 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:47:16 has no hits.
UFO11891.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:35 Download gff for
UFO11891.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32182-RA | 1..917 | 9..928 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:36 Download gff for
UFO11891.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32182-RA | 46..970 | 1..928 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:29 Download gff for
UFO11891.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32182-RA | 46..970 | 1..928 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:29 Download gff for
UFO11891.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17758157..17759081 | 1..928 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:36 Download gff for
UFO11891.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17751257..17752181 | 1..928 | 97 | | Plus |
