UFO11902.5prime Sequence
393 bp (294 high quality bases) assembled on 2012-06-29
> UFO11902.5prime
TCTGAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTT
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGCCATCGAAAAAG
AAAAAATACAACGCACGCTTTCCGGCGGGTCGCATCAAGAAGATCATGCA
AAGCGACGAGGAAATCGGGAAGGTGGCCCAGGCGGTGCCTGTTATCATCT
CACGCACGCTGGAGCTCTTCGTGGAGTCGCTGCTGACCAAGACGCTGCGC
ATCACGAATGCGCGCAACGCCAAGACGCTATCGCCATCGCACATGGAGGC
AGTGTATCGTATCCCGAGAAACGCTTTGACTTTCCTCCAGGGAGCTGGTC
CGCAACATACCCGACATCATGGTGGCCGAGGAGGCCGCCTACA
UFO11902.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:47:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
NC2alpha-RA | 1235 | CG10318-RA | 96..399 | 86..393 | 1395 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:47:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21670495..21670757 | 127..393 | 1095 | 96.6 | Plus |
2R | 25286936 | 2R | 21670247..21670289 | 86..128 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:47:40 has no hits.
UFO11902.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:40 Download gff for
UFO11902.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
NC2alpha-RA | 80..382 | 86..392 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:52 Download gff for
UFO11902.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
NC2alpha-RA | 96..398 | 86..392 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:42 Download gff for
UFO11902.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
NC2alpha-RA | 96..398 | 86..392 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:42 Download gff for
UFO11902.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21670247..21670288 | 86..127 | 100 | -> | Plus |
2R | 21670496..21670756 | 128..392 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:52 Download gff for
UFO11902.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17557752..17557793 | 86..127 | 100 | -> | Plus |
arm_2R | 17558001..17558261 | 128..392 | 97 | | Plus |