UFO11903.5prime Sequence
1144 bp (1046 high quality bases) assembled on 2012-06-29
> UFO11903.5prime
AATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTATAGCATA
CATTATACGAAGTTATCAGTCGACATGGCATCTTCATCCGCTTGGCTAGT
CCTTCTCATGGGCATTGGCCTTTCTGGCGCCCTGGATTTGAATTTACAAA
ATAGCAGTAGCAAACTCTTGACGGTTCTCAACACATCTGCTCCGGTTCAA
GAGTTGCTATACCACATCGATGTCTGGCGAAATGAGGCAGCTGCTGTGGC
CCAGGATAATCCAACTTCTTCCAACCTGGAATCAGTAATTCGCTCTGAAG
TTGGAGGTGACTGGGAGCGGGGTAGGCTAGTCCTTCAATTAGCGAATCAA
GCCAGAACTTTGGAGCTCAAGCAGGCTATTTACACAGCGTTGTGGAAGGA
GCTCCAGCAGACCAAGCAGATTTACGATCCCCTAAAGATTTTAGAATTTT
ATGACCAGCTGGCTGTGCACACTGATGTTCCACTCCAACTTATGGATCAT
ATTTACCGGGCTTTCATCAGCCGAAGTGCCCAGTTATTGGAAGCTCCATT
TCACACAGCCAGTCGATTGGCCACTTTTCCATTGGTAAACTCTCTGGTCA
ATCGTCTAACATTCAGCACTTTGGATTATCTGAGAGACATTCTGGAAGTT
CTCTACGATGCTGTTTTGGCCCTAGAAACACCTTTAAGTGTAGTGCAGCG
CCTGGGAAATTTAACGGCTAGTTTGAGGCAATTGGCTCAAGCTAATCTTC
AATTACTTAGCAGGGAGGAACTCAAACGTGGAAATCCCGAAGTGCAAAAG
GCCCTGCAGAGCAACATCAGAAATTTGCTTTCGCAGCCTGGGTTTGAAAA
AGAAGTTGCAAAATCCCTCCATCGGAATCTATGCACACCTTTCCGAAGAC
GAGCACTGCTGTACACCGCTCGAAAGTATGCATCCGGAATGTGACTGAGA
AATTCGTACATTTACGATGCCCGCAGACGTACCTCATCTGCAGTACGCTC
GAGATCCAAGAGCTGCGTATTTCATCACGTGTCACAGTAACGACAGCGCG
CATTGCTTTCATAGTGCCTCTGCGTAGTCGCTCATCCTCATGCAACAGCC
CTGGCATGCAGCCATGCAACAACTCGATACAACGTTACACGCTG
UFO11903.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:47:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6602-RA | 1401 | CG6602-RA | 6..1087 | 75..1128 | 4630 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:47:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6072144..6073086 | 75..1009 | 4290 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:47:43 has no hits.
UFO11903.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:41 Download gff for
UFO11903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6602-RA | 1..989 | 75..1050 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:55 Download gff for
UFO11903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6602-RA | 1..994 | 71..1050 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:43 Download gff for
UFO11903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6602-RA | 1..994 | 71..1050 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:43 Download gff for
UFO11903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6072132..6073143 | 61..1055 | 97 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:55 Download gff for
UFO11903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6065232..6066243 | 61..1055 | 97 | <- | Plus |
