UFO11907.5prime Sequence
1162 bp (1051 high quality bases) assembled on 2012-06-29
> UFO11907.5prime
AATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTATAGCATA
CATTATACGAAGTTATCAGTCGACATGGAGGAAGAGGCGCCGCGGTTCAA
TGTGCTGGAGGAGGCGTTCAACGGCAATGGGAACGGGTGCGCCAACGTGG
AGGCCACCCAATCGGCCATATTAAAAGTGCTGACGCGCGTTAATCGCTTC
CAGATGCGCGTCCGCAAGCACATCGAAGACAACTACACGGAGTTTTTGCC
CAACAACACGTCGCCGGACATATTTCTGGAGGAGTCGGGGTCCTTGAATC
GCGAGATTCACGACATGCTCGAGAACTTGGGCTCCGAGGGACTGGACGCC
TTGGACGAGGCGAATGTCAAGATGGCGGGTAACGGCAGGCAGCTGCGAGA
GATCCTTTTGGGTCTGGGTGTCAGCGAGCATGTGCTAAGGATCGACGAGC
TGTTCCAGTGCGTGGAGGAGGCCAAGGCCACCAAGGATTACTTGGTGTTA
CTGGACCTTGTCGGTCGTTTGAGGGCTTTCATCTATGGCGATGATTCCGT
TGACGGGGACGCGCAGGTGGCCACGCCAGAGGTTCGACGCATCTTTAAGG
CTCTCGAGTGCTACGAGACCATCAAGGTGAAATACCATGTACAGGCATAT
ATGCTGCAGCAGAGCCTCCAGGAGCGCTTCGATCGCCTGGTGCAGCTGCA
GTGTAAATCCTTTCCCACATCGCGTTGCGTCACCTTGCAGGTGAGCCGGG
ATCAAACGCAGCTGCAGGATATTGTGCAGGCTCTCTTCCAGGAGCCCTAC
AATCCGGCGCGCCTCTGCGAATTCCTGCTGGACAATTGCATAGAACCGGT
GATCATGCGCCCAGTGATGGCCGATTACAGCGAAGAGCCGATGGTGGCAC
CTACGTTCGATTGTCGCTTTCCTACGCCACCAAGGAGCCCAGCTCAGCGC
AGCTTCGCCCGAACTACAAGCAGTCTTGAGAACTCAGCTGCTGCTGCACA
CGCTGGCCGGGATCAACTGCAGTGTGTCAGGACCAACATGTTTTTGGCAT
TATTGCGATCATGTGAGATAAATGCTGAAGTACTGCTGACGATGCTGATC
AGCTGTGCCGAAGCACGAGGATATCGACTCCAGCCTGTGTGAGAGTCGCC
GACTGGACACTG
UFO11907.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:47:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zw10-RB | 2567 | CG9900-RB | 104..1198 | 72..1143 | 4830 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:47:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2604300..2605302 | 72..1066 | 4605 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:47:53 has no hits.
UFO11907.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:43 Download gff for
UFO11907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mit(1)15-RC | 102..1135 | 60..1085 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:01 Download gff for
UFO11907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mit(1)15-RB | 96..1129 | 60..1085 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:48 Download gff for
UFO11907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zw10-RB | 96..1129 | 60..1085 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:48 Download gff for
UFO11907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2604292..2605333 | 60..1092 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:01 Download gff for
UFO11907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2498325..2499366 | 60..1092 | 97 | -> | Plus |
