UFO11908.5prime Sequence
1074 bp (928 high quality bases) assembled on 2012-06-29
> UFO11908.5prime
CAGTCGACATGCACAGGACATATGTAAGCCATGCGATATACGCCATTTGG
CTGGTTATATTCGCCACTGCCGGCATAATGGCCCAGCTAGACCTGGATCA
GATCCAGACCCAGCTGCCCGACCAGCTGAGGAAGTCAAACTTTAGCGTGA
ACGACGCCAAGGAGCTATTTCGCAACAAATGCATCGAGGTGGCCGGCGAG
GAGGCGGGCGTCGAGGCATACGGCGAGATCGAGTCCGGATTCATGGTGCT
AACCGAGTGCCTCAATGGCATTGTCAACTACACGGCAATGCAGCAGGAGA
TACAGGAAGCGTCGCCCAAGGGCGAACTGGATGTGGTCTTCAACAAGTAC
TGCAGCCGGCGTTCGAATGCCGTCGAGTGTGTGGATGCGTTCACGGCCAA
ACTGGTGCCCTGTCTGGTGCAGGAGGAGCGCGAGGGCCAGGATGTCATTA
AGCAGATCATCCAGAGTCTGCTCAACTTTGTGTGCCACAAGGATGGCGAT
CAGATAGCCCTGTTCATTGCCGAAAAGGGACCCGAATGCATTGAGTCCCA
GAAGGACAACATTCAGCAGTGCGTGAACAGCACGTTCTCCGAGTACCTGA
ACGTGTCGGATCTGCAGGACAACCGCATCAGGAGCATGCCCAAGCTGACG
GTCGGTCAGAAACAGTGCGACGAGATGCTGACTCTGCAGGCGTGTGTGGT
CCGTAACTGGAGCAATGCTCGGACATAACACCGGCGAATCTCGTTGAGTC
CATGTTCAACTTCATTCGGAACCAACGATGTGCCGTGACAATCAGAAATC
GCCGCTCGTTGCGGCTGCCGCCAGCGGAGGGAGTCGGGTATTCCCATCAA
GTGTGGACCCATGTGGGCATCTTTTTGCTAATCCTGCGATTCGCTCTACA
AAAGTCTTCTGCAAGCTTTCTAGACCATTCGGTTGGCGCGCGGGCCCAGG
TAGTGGTCATAATCATAATCATAATCATATCGATATCCACACTAGCCTAG
GAGATCCTGCTCATGACTAGTGCTGGATTCCACCATAAAACGCCCGGCGC
AACCCGAGCGTCCGATGTTCCAGA
UFO11908.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:47:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9917-RB | 1726 | CG9917-RB | 203..1106 | 8..910 | 4435 | 99.6 | Plus |
| CG9917-RA | 1801 | CG9917-RA | 278..1181 | 8..910 | 4435 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:47:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16322051..16322954 | 910..8 | 4360 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 17:47:55 has no hits.
UFO11908.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:43 Download gff for
UFO11908.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9917-RA | 289..1204 | 1..918 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:03 Download gff for
UFO11908.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9917-RA | 271..1186 | 1..918 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:49 Download gff for
UFO11908.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9917-RA | 271..1186 | 1..918 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:49 Download gff for
UFO11908.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16322040..16322957 | 1..923 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:03 Download gff for
UFO11908.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16216073..16216990 | 1..923 | 98 | | Minus |
