UFO11910.5prime Sequence
1053 bp (938 high quality bases) assembled on 2012-06-29
> UFO11910.5prime
CAGTCGACATGGCGCTGGTTTACGGGGTTGAAAAGAAGACGGTACCCACC
CACATGAAATTCGTGATGGGCGGAACCTCCGGAATGCTGGCCACATGCAT
TGTCCAGCCGTTGGACCTTCTCAAGACCCGAATGCAGATATCAGGAACTT
TAGGCACACGCGAGTACAAGAACTCATTTGAGGTTCTATCGAAGGTTTTG
AAGAACGAGGGGATATTATCCTTGTACAATGGATTGAGTGCCGGACTATT
GAGACAGGCCACGTACACATCAGCCAAGATGGGTGTTTACCAGATGGAGT
TGGATTGGTATCGCAAGAACTTCGGAAATTATCCATCTATGGTGGCCAGT
ATGACGATGGGCATTGTGGCTGGCGCCTTTGGAGCCATGTGTGGAAATCC
AGCGGAGGTGGCCCTGATCCGGATGATGTCCGATAACCGCTTAATGCCGG
AGGACAGGCGTAATTACAAGAATGTGGGTGATGCCTTTGTAAGAATTGTG
AAGGATGAGGGCGTGGTGGCGCTCTGGAGAGGATGCTTGCCGACAGTGGG
TCGTGCCATGGTCGTGAATATGGTGCAGCTTGCCTCCTATTCACTGATGA
AGAACCAATTGCATGGGTATCTCAGTGAAGGAATACCTCTTCACCTGACC
GCCGCCCTGGTGTCTGGTTTGCTGACCTCCGTGACCTCAATGCCACTGGA
CATGGCCAAAACACGCATACAGCAGATGAGGTGATCGATGGCAAGCCGGA
ATACAGTGGTACCATCGATGTACTGAAAAGGTGCTGAAAATGAAGGCGCC
TTTGCCGTGTCAGGTTTCACTCGTATCTAATGCGTATGGGTCCACACACG
ATATTTTCATTGTCTTCTTGGAGCAATGATAAGCCTACAGCAGCATATGC
TCATTGATTCGCTATCCGATTCGGTACTGCAGCTTTCTAGACATTCGTTT
GGCGCGGCGGGCCCAGGTAGTGGTCATATCCTAATCATTATCTAATCATA
TCCACTAGCCTAGGAATCCTGGTCAGAAGCGCTGATTCTCACAAATAAAA
CGC
UFO11910.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:47:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18418-RA | 1142 | CG18418-RA | 80..1012 | 7..927 | 4345 | 98.5 | Plus |
| CG7514-RA | 1188 | CG7514-RA | 138..775 | 79..725 | 645 | 74.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:47:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4689059..4689991 | 927..7 | 4095 | 98.2 | Minus |
| 3L | 28110227 | 3L | 4688136..4688637 | 586..79 | 570 | 74.6 | Minus |
| 3L | 28110227 | 3L | 4688000..4688074 | 725..651 | 195 | 84 | Minus |
Blast to na_te.dros performed on 2014-11-28 17:47:28 has no hits.
UFO11910.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:38 Download gff for
UFO11910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18418-RA | 73..1012 | 1..927 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:43 Download gff for
UFO11910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18418-RA | 73..1012 | 1..927 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:35 Download gff for
UFO11910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18418-RA | 73..1012 | 1..927 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:35 Download gff for
UFO11910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4689059..4689998 | 1..927 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:43 Download gff for
UFO11910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4689059..4689998 | 1..927 | 98 | | Minus |
