UFO11911.5prime Sequence
1093 bp (960 high quality bases) assembled on 2012-06-29
> UFO11911.5prime
CAGTCGACATGGCCAAGAACAGCTTTAAGACTTTAATCAGCCAGAAACAC
AAAACGTTTCCGGCGGACCTAAATATGTACGGAATGAAGTGTAAATCGCA
GCTGCTGGAGGATCAGGAGAACGTGACCCTGATCATCAATCGGCGGAACT
CAATCCGCCAGAAGCCGAAGAGTTGGGCTTGGACCCTGCTGCGTTGCAGG
TGGCAAAAGAAGCTAGTTCTCTTATTAATATTTATTTGTGTGTGCGTTCT
GATTGTTTTCGCCAACACGCATCTCTTGGTTCGCGGCAACATCCTCTCGG
CCTTCCTCTCGAGCCGGCTTAACAAGCATTCGCACGCGGAGAAGCAGGAG
GCGAGGTATCCCGACATCCCGGCCACGACCCCGTCAGTTCCCCCGGTGCT
GAGGCCCACGCACTATCTGCTCAACTACTCCTCCACCCAGCTGGAGCTGA
GCTCGCACTTGAACGGTCTGTCCTCAGACTACAACATATTCGTCATCTAC
ACGCGGGAGAACTACCACTTGAACCTTAAGTTCGACCTGTTCGCCCACAG
CTTGCTGAAGCACACCAGTGCCCAGCTGCATCTGCACGTGATCACGGACA
GCGAGAGCCAGCCCTCGGTGCTGGAGATCCTGCAGCGACAGATCAGGCGG
TTCCGGCGGACGGTCATATACACCATATACGACGTGAAGGTCTGCTCCAG
CATCATACAAGACATAGCCGCCAAGTTGTCCCCGTACTTCAGCTCAACCC
CGAACTCGTACTACAGCGACTCCCTCTTTTTCCTGTCCCTCGGCCTTCAC
AGGATCGCCGACAGGAGCCTAAACAGAGCCATTCTGCTAGATTGTGATAT
AGTCTTCCGATCCGATGTCCGACTGCTGTTCAATGAGTTCGACACTTTCT
GCCGCACCAGCTGTACGGACTGGCACCGGACTGACCCCGTCTACGGCACA
TCCTCTACGCTTTCGCGGGGCGCTATCGAAGACAAGTTTCGGGAATCCCT
ACTATCGACCACAACGAGGGGCACAACATAGGCGGTCCACCACGGCCTAT
TCAGCCTGATCGGGCGTGTCCTGCTGCCTCCTTAACGCATCGT
UFO11911.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:47:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11388-RA | 1639 | CG11388-RA | 227..1329 | 4..1091 | 4885 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:47:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24022569..24023576 | 4..1006 | 4620 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:47:31 has no hits.
UFO11911.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:38 Download gff for
UFO11911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11388-RA | 193..1264 | 1..1059 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:45 Download gff for
UFO11911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11388-RA | 223..1294 | 1..1059 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:37 Download gff for
UFO11911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11388-RA | 223..1294 | 1..1059 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:37 Download gff for
UFO11911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24022565..24023636 | 1..1059 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:45 Download gff for
UFO11911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19910088..19911159 | 1..1059 | 97 | | Plus |
