UFO11916.5prime Sequence
652 bp (518 high quality bases) assembled on 2012-06-29
> UFO11916.5prime
TGAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCG
TATAGCATACATTATACGAAGTTATCAGTCGACATGTTGGACAATAATTC
TTGTGCGCAAACCAATATTTTAACCAGTAAAGAAATGGCGAATAACAGCC
CGACCCGCGGCTCTGTCATGCTGCTGACGCTGGTTTTGCTGCTACTGAGT
AGAAAAATCGGTTTGGTAGATGGGCACAAAGTTACGGCTACGTCAATTTC
CAATCACAATTACCCGGTAGAAGAGCATACAGTCATCACCCATGATGACT
ACATCCTTACTATTTACCGCATCCCATCATCCCCAAACCGAAGTCATCTA
AATAGAGCTGGGCGAAGGGCTGTAGTGTTTTTGCAACATGGCATCCTGAG
TGCTTCCGACGACTGGATTATAAACGGACCAGAGGGCGTCTCTGGCCTAA
ATGCTTGCAAGACCGCCGGCTACGATGGTCTGGCTGGGGCAATGCACGTG
GCAACACGTACCTCACGGCAGCCACAGCATAATCCATTCCGGAAAACCGT
CCGACTTTTGGCGGTTTCCAGCTGGGACCGAAAAAAGGGGTCTAATGAAC
CCCCCAACCCATGCCTAAAATAAAGCCCCGGGGCAAAAAAACCAATCCCA
AC
UFO11916.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:48:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3635-RC | 1301 | CG3635-RC | 36..515 | 84..575 | 2095 | 96.8 | Plus |
| CG3635-RB | 1381 | CG3635-RB | 36..515 | 84..575 | 2095 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:48:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22182737..22183017 | 236..522 | 1125 | 96.9 | Plus |
| 2L | 23513712 | 2L | 22175450..22175603 | 84..237 | 770 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:48:14 has no hits.
UFO11916.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:47 Download gff for
UFO11916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3635-RB | 27..520 | 75..581 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:14 Download gff for
UFO11916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3635-RB | 27..520 | 75..581 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:40:01 Download gff for
UFO11916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3635-RB | 27..520 | 75..581 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:40:01 Download gff for
UFO11916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22175441..22175602 | 75..236 | 97 | -> | Plus |
| 2L | 22182738..22183069 | 237..581 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:14 Download gff for
UFO11916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22175441..22175602 | 75..236 | 97 | -> | Plus |
| arm_2L | 22182738..22183069 | 237..581 | 94 | | Plus |
